| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4077 |
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| Symbol | |
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| ID | 5610887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4990730 |
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| End bp | 4991191 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935032 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475809 |
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| Protein GI | 157377209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2731] Beta-galactosidase, beta subunit |
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| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCG ATACTTTAAG TAATTTAGAC CTTTACTCAC ACATCAGCCC GAGAATAGCT
GCGGCTTTAA CCCACTTGGC TGAGACAGAC TTCACCCGCC TCGAGGTTGG AAGCTACGAA
CTCGATGGCA AGAACCTATT CGTTATCGTC AATGATTATG AAACTAAGCC TAAGGAAGTG
GAGCCTTTTG AGGTACATGA GCACTATATC GATGTCCAGT ATGTGGTTAG CGGTGAAGAG
GAGTTTGGCT TTCTGCCATT AGGCTCTCAG ATCCCCTCGA TGCCGTATAA CCCAGAGCAC
GACTATGCCG AATTCGACTA TGAAGCCAAC AAGAGAGAGG CGGCGTTTAT CCCCTTGAAA
GCCGGGATGT TTGCGATATT TTTCCCTGAT GATATGCACA TGCCTGGGAC AAGTTCGACT
CCGAATAAAG TCCGTAAAGT CGTCATCAAG GTGAAGGCTT AA
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| Protein sequence | MIVDTLSNLD LYSHISPRIA AALTHLAETD FTRLEVGSYE LDGKNLFVIV NDYETKPKEV
EPFEVHEHYI DVQYVVSGEE EFGFLPLGSQ IPSMPYNPEH DYAEFDYEAN KREAAFIPLK
AGMFAIFFPD DMHMPGTSST PNKVRKVVIK VKA
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