| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4074 |
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| Symbol | |
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| ID | 5610270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4988256 |
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| End bp | 4988831 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640935029 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001475806 |
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| Protein GI | 157377206 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC AGGAGATGGC GTTAATCACA CGTGATGCCT TGCTTTTGCC CGATGGAAGG
ATTGAGATCA GAGTGGTCGA CCCTTGCTAC CTGCATGTCG TGGCCGATGT GCTGAAAGGA
AAGTATCCCC TGGCATTCGG TATGTTCAAG GCTAATGGCC TCCCCCCTTG CTACCCCAAT
GCTACTCAAT GTGAAATTAT AGATTTTAAT CAGCTCCAGG ATAATTCTCT TAGCATAGTA
CTCGAAGGAA AACAGAGGGT AAAAATCTTA TCTGCGGCTA AACGCAAGGA TGGTACCTGG
ATTGCGAGAA CGCTTCGCTC CAGTAACTGG GATCAGGAGC CGATAAGAGG TGAGTTTGAA
TTGATCAGTG CCGCATTAGA GCAGTTTTAT GAGGTTAATC CCGAGCTGAG TGGCTTATAT
GCCAACATCC ACCTCGAGGA TGCATCCTGG GTTAGTCAAC GTTGGTTGGA AGTACTGCCT
CTCTACAACA AAGACAAGCA GGTGTTGATG AATCAACCTA ACTGCCATAA AACCATGGAT
TTTGTGCTCG ATCTGATTAA GTCTCATGTG GACTAA
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| Protein sequence | MQTQEMALIT RDALLLPDGR IEIRVVDPCY LHVVADVLKG KYPLAFGMFK ANGLPPCYPN
ATQCEIIDFN QLQDNSLSIV LEGKQRVKIL SAAKRKDGTW IARTLRSSNW DQEPIRGEFE
LISAALEQFY EVNPELSGLY ANIHLEDASW VSQRWLEVLP LYNKDKQVLM NQPNCHKTMD
FVLDLIKSHV D
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