| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4063 |
|---|
| Symbol | |
|---|
| ID | 5610295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 4975186 |
|---|
| End bp | 4976289 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640935018 |
|---|
| Product | N-ethylmaleimide reductase, putative |
|---|
| Protein accession | YP_001475795 |
|---|
| Protein GI | 157377195 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTT TTACCCCTTA TAAGAAGTCA GAACTGATGT TAAACAACCG CATGGTGATG
GCACCTATGA CTCGCTCACG CACCACACAG CCGGGAAATA TTCCCAATGA GATGATGGCA
ACTTACTATG CCCAGCGTGC ATCGGCAGGC TTAATTATCA CCGAAGCTAC CCAGATCTCC
GATGACAGCC AGGGTTACTC CTTCACCCCC GGAGTCTATA CTCAGGCGCA GATAGCGGGC
TGGCAGAAGG TCACCTCTGC GGTACATCAG GCGGGCGGAA AGATAGTTAA CCAACTCTGG
CATGTCGGCC GCGTATCTCA TCCGATATTT CAGCAAGGGC AAGCTCCGAT AGCGCCATCG
GCGATTAAAC CCACAGATAC CCGAGTGTGG GTGGTAGATG GAACACATCC CGAAGGTCAG
ATGGTCGATT GCCCGATCCC AAGAGAGATG ACGCGGGCCG ATATCGACCG CGTAGTGGCA
GACTTTTCAC AGGCGGCGAA AAACGCCATC GATGTAGGCT TCGATGGTGT GGAGATCCAT
GGTGGCAACG GCTACTTGAT TGACCAGTTC TTGAGAACTA ACTCGAACCA CAGAAGCGAT
GCCTATGGTG GCTCGCCCGA GAAGCGCATT CGTTTTTTAC TAGAGATAGT GGAGGCCGTG
AGTGCCAAAA TAGGAGTCGA TAAAGTGGGT GTTCGTCTGG CTCCCTTTGT GACATTCAAG
GATATGGGCT GCCCCGAGAT TGTCGAGACT ATCCTGTTGG CCGCTAAACA ACTGGGCGAA
CTCGGCATTG GCTATATGCA CCTGTCTGAG GCGGACTGGG ATGATGCACC GCAGATCCCT
GAATCATTTC GTATCGAGCT CAGAGAGGTA TTCAAGGGAA CAATTATCGT CGCTGGCCGT
TACGATGTGG AGCGCGCCAG TGAGATCATC GACCAAGGCT ATGCCGACCT GGTGGCCTTT
GGCCGCGCGT TTATCGCCAA CCCCGACTTG CCCTATCGTT TGCAGGCTGG TAAACCGTTA
GCCGCCTTCG ATAAAGGCCC GCTATTTGGT GGCGGGGCGG CAGGGTATAT TGATTACCCA
GATTCGGCTG ACCACTTGGC CTAG
|
|---|
| Protein sequence | MSLFTPYKKS ELMLNNRMVM APMTRSRTTQ PGNIPNEMMA TYYAQRASAG LIITEATQIS
DDSQGYSFTP GVYTQAQIAG WQKVTSAVHQ AGGKIVNQLW HVGRVSHPIF QQGQAPIAPS
AIKPTDTRVW VVDGTHPEGQ MVDCPIPREM TRADIDRVVA DFSQAAKNAI DVGFDGVEIH
GGNGYLIDQF LRTNSNHRSD AYGGSPEKRI RFLLEIVEAV SAKIGVDKVG VRLAPFVTFK
DMGCPEIVET ILLAAKQLGE LGIGYMHLSE ADWDDAPQIP ESFRIELREV FKGTIIVAGR
YDVERASEII DQGYADLVAF GRAFIANPDL PYRLQAGKPL AAFDKGPLFG GGAAGYIDYP
DSADHLA
|
|---|
| |