| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4055 |
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| Symbol | |
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| ID | 5610041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4965755 |
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| End bp | 4966339 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640935010 |
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| Product | putative methyltransferase |
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| Protein accession | YP_001475787 |
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| Protein GI | 157377187 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAATG AATGGGATGA GTACGCTCCC GAGTGGGATA AAGACCCGTC AGTAAAAGAG
TATGCACTTA AGGTGTTATC TGAGCTGAAT AACAAGATCC TGTTAGAAGA GTTAACCATA
CTCGATTTTG GCTGTGGCAC TGGTAATTTA ACTCAATTGC TCAGCCCAAA TGCTAAACAC
ATTGTGGCGT TGGATGGTTC ACGTGAAATG ATTAAATTAC TCGAGGAGAA AGAACTCGAC
AATGTATCGA CAATTTCAGA TTTTCTTTGC GATGAATTGA TCAACGATCA TCCCTATTTA
AACCAAAAGT TCGATCTTAT CATCGCCTCT TCCGTATGCA GTTTCTTACC CGATTATGAA
GCAACTTTAG GCCAGCTAAA ATCCTTATTA ACAAGCGGTG GGCTCTTTAT CCAGTTCGAT
TGGCTCGCAC AAGATGAAGG TAGCTCAATG GGCTTAACCA AACAACGCGT ACAGCAATGT
TTAGAGACAC ATGAATTTAA ACAAACCACT ATCGAGCTCC CTTTTACCAT GACCAGTTCA
AAAGGCTCGA TGGATGTCAT CATGGCTTGT GGGACAAATA TCTAA
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| Protein sequence | MTNEWDEYAP EWDKDPSVKE YALKVLSELN NKILLEELTI LDFGCGTGNL TQLLSPNAKH
IVALDGSREM IKLLEEKELD NVSTISDFLC DELINDHPYL NQKFDLIIAS SVCSFLPDYE
ATLGQLKSLL TSGGLFIQFD WLAQDEGSSM GLTKQRVQQC LETHEFKQTT IELPFTMTSS
KGSMDVIMAC GTNI
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