Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4053 |
Symbol | |
ID | 5610039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4963598 |
End bp | 4965094 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640935008 |
Product | anaerobic nitric oxide reductase flavorubredoxin |
Protein accession | YP_001475785 |
Protein GI | 157377185 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins [COG1773] Rubredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATTC ATGTCAAGAA CAACATCCAG TGGGTCGGGC AACGTGATTG GGAGGTACGT GATTTTCACG GCACTGAATA TAAAACTGAG AAAGGGACCA GTTATAACAG TTATCTGATC CAAGAGGAGA AAACGGTTCT GATCGATACC GTCGATCATA AGTTCAGCCA TGAGTTTGTA CAAAAACTAG AGATGGAGAT CGATCTGAAG CAGATCGATT ACATCGTCAT TAATCATGCC GAAGAAGATC ATGCCGGTGC CTTGGCGGTA CTCTTGGCAA AAATCCCTGG CACACCCATC TACTGCACCG AAAATGCCAT TGACTCTATC ACAGGGCATC ACCACCACCC CGAGTGGAAC TTCCATATCG TAAAAACCGG CGATAGCTTA GATATTGGTA ACGGTAAGCA ACTGATCTTC ATCGAGACGC CTATGTTGCA TTGGCCCGAT AGCATGATGA CCTATATGAC CGGCGATGCC GTGCTATTCA GTAACGATGC CTTCGGTCAG CATTACTGTG ACGAGCGCCT GTTTAATGAT GAGGTCGATC AGACTGAGTT GATGGATCAA TGTCTGCGCT ATTACGCCAA CATTCTCACC CCCTTCAGCC CGTTGGTGAC CGCGAAGATC CATGAAGTAC TCAGCTTCAA CCTGCCCGTC GATATGATTG CTACCGCCCA CGGTGTGGTA TGGCGCGAGG ATCCGACACA AATTATTCAT AAATACTTAG AGTGGGCCGA CGAGTATCAG GAAGATCGTA TCACCATCTT CTACGATTCA ATGTCTAATA ATACTCGCAT GATGGCGGAT GCCATCGCTC AAGGGATCCA TGATGTCGAT CCTAAGGTTG CGGTGAAGAT CTTTAACGTC TCCCGTCACG ATAAGAATGA GATCTTGTCT AACCTGTTCC GCTCCAAGGG CGTGCTTGTG GGCTCATCGA CCATGAATAA TGTCATGATG CCGAAGGTTG CCGGCATGCT GGAGGAGATC ACCGGACTGC GCTTTAAGAA CAAGAAGGCC GGCGCCTTCG GCAGTTTCGG TTGGAACGGT GGTGCGGTAG ACCGTATCCA TACACGTCTG ACCGATGCCG GATTTGAGAC GCTGTTAGGG CTAAAGACAA AGTGGAGGCC GGATGGAAAG GCGCTGCTGG AGTGTCGTGA GCACGGTAAA GAGGTGGCGC GTCAATGGGC GTTGCACCCG CTGGAGAACA TCGAGTCTAA GCAGGCAAGC CCGGTCAACG AGCCCCTTTT GAATACAGCT GAGGCATCAG AGCCTGCTGT GAATGCCCAA GTGTCATCAA CCTGTGTCGA GACGACCGCG GGACAAAGCA TGTTGTGCAG CGTCTGTCAG TGGGTTTACG ACCCGGCGCT GGGTGAGCCT AATCAAGATG TCGCCCCGGG AACCGAGTGG ACTGATGTGC CAGAGACCTT CCTCTGCCCG GATTGCAGCT TAGGTAAGGG AGTGTTTGAC CCTATTGCCA AAGAGGCCGC AGCATGA
|
Protein sequence | MAIHVKNNIQ WVGQRDWEVR DFHGTEYKTE KGTSYNSYLI QEEKTVLIDT VDHKFSHEFV QKLEMEIDLK QIDYIVINHA EEDHAGALAV LLAKIPGTPI YCTENAIDSI TGHHHHPEWN FHIVKTGDSL DIGNGKQLIF IETPMLHWPD SMMTYMTGDA VLFSNDAFGQ HYCDERLFND EVDQTELMDQ CLRYYANILT PFSPLVTAKI HEVLSFNLPV DMIATAHGVV WREDPTQIIH KYLEWADEYQ EDRITIFYDS MSNNTRMMAD AIAQGIHDVD PKVAVKIFNV SRHDKNEILS NLFRSKGVLV GSSTMNNVMM PKVAGMLEEI TGLRFKNKKA GAFGSFGWNG GAVDRIHTRL TDAGFETLLG LKTKWRPDGK ALLECREHGK EVARQWALHP LENIESKQAS PVNEPLLNTA EASEPAVNAQ VSSTCVETTA GQSMLCSVCQ WVYDPALGEP NQDVAPGTEW TDVPETFLCP DCSLGKGVFD PIAKEAAA
|
| |