| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4052 |
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| Symbol | |
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| ID | 5610038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4962456 |
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| End bp | 4963601 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640935007 |
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| Product | nitric oxide reductase |
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| Protein accession | YP_001475784 |
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| Protein GI | 157377184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC CCATCGTTAT TATAGGCAGC GGTTTCGCCT CCTATCAGTT GGTGAAGACG
ATACGCAGGC AAGATAGCCA ACAGGCTATT ACTGTGATCA CCGCAGATAG TGGTGATGAC
TATGCCAAAC CGGATCTGAG TCATGTGTTT ACTAAGGGGC AGTCGGCCAA AGATCTGATT
AAGATGACCG CCGATGAGTT TGCCAGTAGC TATGATATCA CCCTGTTGCA TCATAGCCGG
GTCGAGAGCA TAGATAGGTT GCAGAAGACC TTGCTCTGCA GTGGCGAATC GATCGCCTAT
GGGCAACTGG TGCTGGCGAC GGGGGCCAAG GCCTTCGTGC CACCCATAGA TGGAGATGCG
GCAGATCGAA TAATCACCCT TAATGGCTTG GAGGAGTATC GGAGTGCTCA GGCGGAGCTT
GCGAGTGCCA AGTCTGTGTT GGTGATCGGG GCCGGCCTTA TCGGCACCGA AATCGCTATG
GATCTGGCCA GCAGCGATAG ACGCGTGATA TTAACCGACA GAGCCGAAGC TCTGCTTCCG
GGCCTGCTAC CCGACTTTAT CTCTTCGCAA CTGTTTCAAT CTCTAGGCAA TCAAGGGGTG
AAGATAGCGT TGGGGACGCA AGTCGAGCGG TTGCAACAAG CCGGAGATGC TATCTCTGTA
ACGCTGAGAA ACGGGCAAGA GTACAGTGTC GATGCCGTGG TATGTGCGGC GGGCCTAAAA
CCCAATATTC AGCTGGCGGC TGAGAGCGCG CTTAAAACCA ATCGCGGCAT AGTGGTGAAT
CGACAGCTGC GAACCTCGAC TGCGGATATT TTTGCCCTGG GAGACTGCGC CGAAATAGAG
GGGCATCTGC TGCCATTTCT GCAGCCGATA TTGATGAGCG CCAATGCCCT GGCTAAAACC
TTACTCGGTC AGGCCAGCGA TGTGGCATTG CCGCCTATGA TGGTTAAGGT GAAAACGCCA
CGTCTGCCTA TACAGCTAAG TGGCAACACG AGCCGTGCCG ACGCCAATTG GCAGATGGAT
GCAAACAGTG AGGGGATGAC GGCCAGAGCC TTCGATGAGG AGAAAAAGCT GATTGGCTTC
GTCGTGACCG GCGGTCATAT GAAGCAGGCG TTTTCGCTGT TGCGTGAGCT TCCGCCGACG
ATTTAA
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| Protein sequence | MNLPIVIIGS GFASYQLVKT IRRQDSQQAI TVITADSGDD YAKPDLSHVF TKGQSAKDLI
KMTADEFASS YDITLLHHSR VESIDRLQKT LLCSGESIAY GQLVLATGAK AFVPPIDGDA
ADRIITLNGL EEYRSAQAEL ASAKSVLVIG AGLIGTEIAM DLASSDRRVI LTDRAEALLP
GLLPDFISSQ LFQSLGNQGV KIALGTQVER LQQAGDAISV TLRNGQEYSV DAVVCAAGLK
PNIQLAAESA LKTNRGIVVN RQLRTSTADI FALGDCAEIE GHLLPFLQPI LMSANALAKT
LLGQASDVAL PPMMVKVKTP RLPIQLSGNT SRADANWQMD ANSEGMTARA FDEEKKLIGF
VVTGGHMKQA FSLLRELPPT I
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