| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4047 |
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| Symbol | |
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| ID | 5609871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4956011 |
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| End bp | 4958293 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640935002 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001475779 |
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| Protein GI | 157377179 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGC TCGATAGGCG GAACTTTTTA AAGGGAGCTG GGGCGGGAAG CGCAACATGC
GCTCTGGCGA CTATGCTACC GGGATCTTTA GCGGCATTGG AAAATGCACC ACTTCAAGGA
GTGGGCAAGG AGGTCGCCAG TATCTGTGAG ATGTGCTCTA CCCGCTGCCC GATTTCGGCG
CGTGTGGTCG ATGGCAAGAA TGTCTTCATT ACGGGTAATA AGGAGGCAAA ATCCTTTGGT
GGCAAGGTGT GTGCCAGAGG TGGTGCCGGC CACAGCCTGC TCTATGATCC ACAACGGATC
GTCAATCCAC TCAAGCGTGT CGGTGAGCGT GGTGAAGGCA AGTGGGCCGA GATTAGCTGG
GATGAAGCCT ATGAGATGAT GGCTACCAAC CTGAACCGGA TTAAGCGTGA GCATGGTCCG
GAGGCTGTGG CATTTTCCTC CAAGAAAGGT TCGCTCTCCG GTCACTTCTT CCATCTGGCC
AAGGCATTCG GCAGTCCGAA TACCTTTACC CATGGCTCGC TTTGCCCCGG AGCCTATGTG
ATCGCCGCCA AATCCATGTT TGGCACTAAG CTGAAGCGGG ATCTGGGCAA CTCTAAGTAC
ATCATTAACT TCGGTCACAA TATCTATGAA GGCATCAACA TGTCTGAGAC CCGTGGCATG
ATGAAGGCGC AATCGGAAAG AGGTGCCAAG CTGGTGGTGT TCGAGCCCCG CTTCTCCGTG
GTTGCCGATA AAGCCGATGA GTGGCATGCA GTGCGTCCCG GAACAGATGT AGCGGTGGCG
CTGGCGCTGT GTCATGTGCT GATCACCGAC AAGCTGTATG ACCAATCCTT CGTTGAACGC
TATGTGGTCG GTTTTGAAGA GTTTGCCCGG GAGGTGAAAG CTTATACGCC TGAGTGGGCC
GAGGGTATTA CCGATGTGAA GGCGAAAGAT ATCCGCCGCA TCGCCTATGA GCTAGCGGCC
GCAGCCCCTC ATGCCGTGGT TGATTTCGGA CACAGAGCGA CATTCACTAC CGAAGAGTTT
GATATGCGCC GGGCGATTTT TGCCGCCAAC GTACTTATCG GCAATATCGA GCGTAAAGGA
GGGCTATATC TGGGCAAGAA GGCCAAGACC TATAACAAGT TTGCCGGTGA AACTGTCGCG
CCAAAGTTAG CCAAGCCTGG CGTGGAAGGC ATGCCTAAGC CGACGGCCAA GCGCATCGAT
CAGATGGATA AGCAGTACAC CATGGTGTGG AAAAATGGTG GGGTTTATCA GAGCATTCTC
GCTGCTACTC TGGAGGCTAA GCCCTATCAG TTACGCGGTT GGGTTATGAG CCGTACCAAC
CCGATGCAGA CCATGACGGA TAGAGCTAAG GTACTGGAAG CGCTTAAAAA GATGGAGTTT
GTTGCCGTCT GTGATGTGTA TATCAGTGAG ACCGCCGCTT ATGCGGATCT TATTCTGCCT
GAATCGACTT ATCTGGAACG TGATGAGGAG ATTGCCGATA AATCCGGCAA GAATCCCGCC
TACTATGTGC GTCAACGTGT GGTAGAAACC ATAGGTAATA CCAAGCCTTC CTGGCAGATT
TTTAAGGAGG TTGGTGATGC GCTGGGCTTA AGCAAGTTCT ATCCCTGGGA GAACATGGAG
ACCTTGCAAC TGGCTCAGAT GAAACGGGAT GACAAGGCAT TGAGGCACAT CAGGGAGAAG
GGCTATGTCA GCTATGGTAA GCCATTGATG TTGCGTGAGC CCTCTATGGT GGCCAAGTTT
ATCGACACCT ATGCCAATGC CAGAAAAGCC GATGATGATG GCACTTATGC CAGTGCACTT
AAGTTTAAGA CACCAAGCGG CAAGATTGAG TTGAGCTCGG CGGCTGTCGA GGAGTTTGCT
CCTGGACGTG GCGTGATCCG TTACCGCGAT GCACCGCTTA AGCGAGCCGA TGAACTCTAC
TTCATTCAGG GTAAGGTTGC AGTACATACC AATGGTGCGA CCCACAATGT GCCCATTCTT
GCCAATCTTA TGGCTGACAA TGCTGTCTGG ATCCACCCGG TAACCGCTGG ACGACTGGGG
ATCAGTCATG GCGATGCGAT TCGCCTGACC AGTAGTGTCG GCAGTGAAAC CAGTTATGCC
ATGGTCACTC CCGGGATCCG TCAGGATACC GTGTTTGCCT ATATGGGGTT TGGCTCCAAA
AACAAGGAGT TAATCAGGGC GTCTGGCAAA GGATTACATT GCGGAAACCT GTTGCCGGAT
AGTACGGCTC CCGTTGTTGG TATGAACTTG CACACCACTG GTGTCAAGGT AGAAAAGGTC
TAA
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| Protein sequence | MIKLDRRNFL KGAGAGSATC ALATMLPGSL AALENAPLQG VGKEVASICE MCSTRCPISA
RVVDGKNVFI TGNKEAKSFG GKVCARGGAG HSLLYDPQRI VNPLKRVGER GEGKWAEISW
DEAYEMMATN LNRIKREHGP EAVAFSSKKG SLSGHFFHLA KAFGSPNTFT HGSLCPGAYV
IAAKSMFGTK LKRDLGNSKY IINFGHNIYE GINMSETRGM MKAQSERGAK LVVFEPRFSV
VADKADEWHA VRPGTDVAVA LALCHVLITD KLYDQSFVER YVVGFEEFAR EVKAYTPEWA
EGITDVKAKD IRRIAYELAA AAPHAVVDFG HRATFTTEEF DMRRAIFAAN VLIGNIERKG
GLYLGKKAKT YNKFAGETVA PKLAKPGVEG MPKPTAKRID QMDKQYTMVW KNGGVYQSIL
AATLEAKPYQ LRGWVMSRTN PMQTMTDRAK VLEALKKMEF VAVCDVYISE TAAYADLILP
ESTYLERDEE IADKSGKNPA YYVRQRVVET IGNTKPSWQI FKEVGDALGL SKFYPWENME
TLQLAQMKRD DKALRHIREK GYVSYGKPLM LREPSMVAKF IDTYANARKA DDDGTYASAL
KFKTPSGKIE LSSAAVEEFA PGRGVIRYRD APLKRADELY FIQGKVAVHT NGATHNVPIL
ANLMADNAVW IHPVTAGRLG ISHGDAIRLT SSVGSETSYA MVTPGIRQDT VFAYMGFGSK
NKELIRASGK GLHCGNLLPD STAPVVGMNL HTTGVKVEKV
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