| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4045 |
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| Symbol | |
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| ID | 5609869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4954488 |
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| End bp | 4955429 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640935000 |
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| Product | polysulfide reductase, subunit C |
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| Protein accession | YP_001475777 |
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| Protein GI | 157377177 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA TATGGGGAGA TATGGCGCAA TACGATCCGG TAACATGGAA CTGGGTCATC
GCAGTTTATC TGTTTATGGC AGGCCTGTCG GCCGGTAGTG TGCTGATCGG CATAGGCATG
CGCTGGTACA GTAAAGACAA GCTAACGGAG AGTCCGATCC TTAAGGCTGC GGCAATTATT
GGTCCGGTGG CGATTAGCTT AGGTCTGGCG TGTTTGGTGT TCGATTTGAC TAAGCCTTTC
CACTTCTGGG TTATTCTGGT CAACTATAAT TTCCAGTCGG TGATGGCGCT TGGTGTGCTG
GCGCTTTTGG TCTACACGCC CTTAGGTATC GCCTATGGTT TAATCGTGTT GCGAGACGAG
TTACCCAAAT GGGGACTCGG CTTCCTGAGC CCGGTTGCTG AAATGCTAAC AGGCTGGCGT
AAGGCGATTG AAGTGGTGCT GTTTGTACTG GCTGTTGGTG TCGGGGCATA CACAGGCTTC
CTGATATCGG CGATGAATGC TTATCCTATG CTCAATACGG CAGTACTGCC GGCGCTCTTC
CTGGTCTCGG GATTATCGGC TGGTGCGGCG GCAAACTCTG TGGTTGCCCT GTTGATGTTC
AAGGTCGATA GTCATGATAA AGAGCTTAGC CGTATGCATG CCCTAGAGCT ACCAGTGATG
GCGACTGAGA TCATGTTCCT GTTTATGTTG TTCTGTGCCT TGTACTTCAA GGGCGGCGCA
GCGGCAGTGG CGCTGGCATC ACTCACCACA GGTGTGTGGG CTGGGGTATT TTGGATTGGA
GTCGTGGGTA TCGGCTTCGG TGTTCCTCTG CTGTCCATGT TGATGCCTGC GGCGACGCGG
CACACTAAAG GTGCCATGTT GATGGTGGCT TGTTCAGGAT TAACCGGGGT ATTGGCACTG
CGTCACTTCA TTCTTTACGC GGGGCAAAGT TACATCTACT AG
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| Protein sequence | MNNIWGDMAQ YDPVTWNWVI AVYLFMAGLS AGSVLIGIGM RWYSKDKLTE SPILKAAAII
GPVAISLGLA CLVFDLTKPF HFWVILVNYN FQSVMALGVL ALLVYTPLGI AYGLIVLRDE
LPKWGLGFLS PVAEMLTGWR KAIEVVLFVL AVGVGAYTGF LISAMNAYPM LNTAVLPALF
LVSGLSAGAA ANSVVALLMF KVDSHDKELS RMHALELPVM ATEIMFLFML FCALYFKGGA
AAVALASLTT GVWAGVFWIG VVGIGFGVPL LSMLMPAATR HTKGAMLMVA CSGLTGVLAL
RHFILYAGQS YIY
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