| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4042 |
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| Symbol | |
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| ID | 5614024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4952037 |
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| End bp | 4952351 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934997 |
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| Product | transcriptional repressor protein MetJ |
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| Protein accession | YP_001475774 |
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| Protein GI | 157377174 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3060] Transcriptional regulator of met regulon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGT GGAATGGCGA TTATATCAGC CCATATGCTG AACACGGCAA GAAGAATGAA
CAGGTAAAGA AGATTACCGT GTCAATTCCC TTGAAAGTGC TTAAGGTTCT GACTGATGAG
CGTACTCGTC GTCAGGTCAA TAACCTGCGC CACGCAACTA ACAGTGAACT CCTGTGTGAA
GCATTCTTGC ATGCCTATAC CGGTCAGCCG TTGCCAAATG ATGAAGATCT GTCTAAAGAT
AAACCTGACA GTATTCCGGC AGAGGTGAAA CGCTTGATGG ATGAGATGGG AATTGAGTGG
GAAGATGTAG AGTAA
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| Protein sequence | MTEWNGDYIS PYAEHGKKNE QVKKITVSIP LKVLKVLTDE RTRRQVNNLR HATNSELLCE
AFLHAYTGQP LPNDEDLSKD KPDSIPAEVK RLMDEMGIEW EDVE
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