| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4040 |
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| Symbol | metL |
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| ID | 5610112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4948243 |
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| End bp | 4950630 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934995 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | YP_001475772 |
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| Protein GI | 157377172 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT GTCATTTGCA TAAATTTGGT GGTTCCAGTC TGGCGGACGC TGACTGTTAC
CGCCGTGTGG CTCATATCCT TCTCACTCAC GGCAATAGCG ACGATCTTGT CGTAGTCTCC
GCCGCGGGTA AGAGCACCAA CTTTCTTTAT AAATTATTAG AGTTAAAAGA TACGGCTCAG
CTCTGGCAAG AAGAGCTGCA GGTGTTGATT AGCTTTCAAC AAAACCTGAT CGAGCAGCTG
CTTTCTAATG AACAGGCCAC AAGTTTAAGA GAACGTTTGT CGATCGATAA GTACCAGCTT
ATCAGTCTGT TTTCACAGGA TGAACTGAAG GAATACGAAC GCAGCGAAGT GGTGAGCTTC
GGTGAGCGCT GGTCCGCGCG CCTGTTGGCG GCCTTGCTCA GGGAGTCTGG TGTTGCTGCG
AGCGATGTCG ATGCCAGAAC CTTGTTATTG GCCGACGAAG GTGGCGTGCC GCAGATAATG
CTGGTCGAGT CCCGTCAGCG AGTTCGGCAA GTACTTAATG ACCATCCCAA TGAAAGATTA
ATTATCACGG GTTTCATCTG TGCCAACAGT CGAGGAGAAA CTCTGTTGCT GGGACGTAAT
GGGTCCGATT ATAGCGCCAC CCTGATCGCC AGTCTGGCCG CCATCGAGCG GGTGACCATC
TGGACCGATG TCGAAGGGGT ATTCAATGCC GACCCCAATA AGATCAACGA TGCTAAATTG
CTGAAGAGTC TCTCTCTGGA TGAGGCAAAC CGTCTCGCTC ATCTGGGCTC GCCGGTACTG
CATAATCGAT CTCTGCAACC TCTTTTCGAT ACCGAAGTCA GCTTAGCCGT ACGTTCGAGT
TATGCATCCC ACACCGACTT TACCCTGATT GCGCCCAGGA GTTCTTCGGC CAGTGCGCCG
GTGGTGACCA ATCTGGCCAG TGTGTCGCTA TTTAACTTCA GAATCACCAC CGAGATCTCC
AACTTAGCCG AATTATTGGC AGCGTCTGGG CTAAACCCCT TGGCTCATTG GCAGCTTGCC
CATGGCCGGG TTGAGTTGGC CTTCACCCAT GAGAATCAGC AGCAGGTGCG AGCTATCCTC
GAATCTGAAG TCCCGGGGGT ATCGGATCTG CTTCTACGTG AGAATCTTGG CCTGGTCGCC
TTAGTCAGCG CCGATGCCGA GCTCTATCGT CGTGGCTTTG CCCGGCTGCT GAGTCGTGAT
GCCAGGCCGT TATTCAATGA CGGCTTGAGT CTGGTCACCT TAGTTCCCTG TGCCAATGTC
AACTTACTTA CTCAGAAAGT ACATAGGCGC TGTGCCGGTC CACGTAAACG TATTGGGGTG
CTATTGCTCG GTGTTGGGAA TATCGGAGAG GCCTGGGTCG ATCTATTTAC GCGCGCACGT
ACATCCCTGA ATAAAGAGTT GGAAGCCTGT GTCGAACTGG TCGGCTTATT GAGTTCAAAG
AAAGCCCTGT TGAAAGAGGA GGGGATAGGT TTAAGCTCCT GGAAACAAGA GTTTGAACAG
CAAGCGACCC CATGGTTGTA TGATCACCTG TTTGAACAGC TCCAAGCACT GGATTGCGAT
GAAATTATCG CACTGGATAT CAGCGCGAGT GCCGAGCTGA CGCTGCAGTA TCCTGAATTT
TTTGCCCGTG GTATTCATGT GGTCAGTGCG AATAAGTTAG CAGGTTCCGG TCCATTGGCT
TTCTATCGTG AGCTGAAGCA GCAACTTGGA AACCGCAGGC TATTTTGGCG CTATAACGCC
AGCTGTGGTG CGGGATTACC TGTGCAGCAC GCACTGAATG ATCTACACAA CAGCGGCGAT
AGTATCGAGG CTGTTGGTGG CATCTTTTCC GGAACCCTCT GTTGGTTGTT TGAAAATTAT
GATGCCAATA AGCCCTTCTC AGAGTTAGTC CTGGAAGCTA AAGGCTTAGG TATTACCGAA
CCCGATCCCC GGGATGACCT TTCCGGCCGC GATATGCAAC GTAAGTTGTT AATACTGGCC
CGTGAAATTG GCCATGAGAT AGAGCTTGAA GATATTGAGC TTAACTCCTT AGTGCCATCG
GCATTAGCCG ATATTCCTCT GGAGCAGTTC CTCGGACGTA TTACTGAGCT CGATGGTGAG
ATGCTACAGC AGTTTCAGGC AGCGGCGGAG CAGGATAAGG TGCTTCGTTA TGTTGCCGGG
CTGGATGTGA TCGAGGGACA GTTAAAGGCG GCAGTTGGCA TTCAATGGGT CGATAGAGAG
CATGCCTACG CTAACCTGAC ACCGGGCGAT AATGTCTTCG TGATCCGCAG TGCCTTCTAT
CAGGATAACC CTCTTATCAT CAGAGGTCCC GGAGCCGGGC GTGAAGTTAC CGCGGCTGCC
GTGCAGTCGG ATCTGGCACA GATCTGCAGA GATCTGTTAC AGGAGTAA
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| Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTH GNSDDLVVVS AAGKSTNFLY KLLELKDTAQ
LWQEELQVLI SFQQNLIEQL LSNEQATSLR ERLSIDKYQL ISLFSQDELK EYERSEVVSF
GERWSARLLA ALLRESGVAA SDVDARTLLL ADEGGVPQIM LVESRQRVRQ VLNDHPNERL
IITGFICANS RGETLLLGRN GSDYSATLIA SLAAIERVTI WTDVEGVFNA DPNKINDAKL
LKSLSLDEAN RLAHLGSPVL HNRSLQPLFD TEVSLAVRSS YASHTDFTLI APRSSSASAP
VVTNLASVSL FNFRITTEIS NLAELLAASG LNPLAHWQLA HGRVELAFTH ENQQQVRAIL
ESEVPGVSDL LLRENLGLVA LVSADAELYR RGFARLLSRD ARPLFNDGLS LVTLVPCANV
NLLTQKVHRR CAGPRKRIGV LLLGVGNIGE AWVDLFTRAR TSLNKELEAC VELVGLLSSK
KALLKEEGIG LSSWKQEFEQ QATPWLYDHL FEQLQALDCD EIIALDISAS AELTLQYPEF
FARGIHVVSA NKLAGSGPLA FYRELKQQLG NRRLFWRYNA SCGAGLPVQH ALNDLHNSGD
SIEAVGGIFS GTLCWLFENY DANKPFSELV LEAKGLGITE PDPRDDLSGR DMQRKLLILA
REIGHEIELE DIELNSLVPS ALADIPLEQF LGRITELDGE MLQQFQAAAE QDKVLRYVAG
LDVIEGQLKA AVGIQWVDRE HAYANLTPGD NVFVIRSAFY QDNPLIIRGP GAGREVTAAA
VQSDLAQICR DLLQE
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