| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4020 |
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| Symbol | |
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| ID | 5612508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4924342 |
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| End bp | 4925508 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934975 |
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| Product | galactokinase |
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| Protein accession | YP_001475752 |
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| Protein GI | 157377152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0153] Galactokinase |
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| TIGRFAM ID | [TIGR00131] galactokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000198069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCGAACC CCGCACAGCG CGCGAACAAA TTATTTGTGC AAACCTTTGG CACTACGGCT
GATGACCTTT ACCTGGCACC GGGCCGGGTA AACTTGATCG GCGAACACAC CGACTATAAC
GATGGTTTCG TTCTGCCGGC AGCTATCAAC TTCCATACCA TTGTTGCGGT AAAACGCCGT
GAGGATGATA TCTACCGCGC CGTTTCCGAT GCCTTTCCCG GTGAGATAAA AGAGTGGGCT
TTCGGCCAGG AAGGTGTCAT GACATCCGAA GATGGCTGGG TCAATTATCT CAAAGGGTTC
ACAGCGGCAA TGGCGGCATC TGGCTTACCC GCAAAAGGGT TAGATATTGC AGTCGTCGGT
AACGTTCCGC TTGGCGCCGG CCTCTCATCC TCTGCGGCTC TGGAACTCGC GTTCGGTACT
GCCGTTAATG ATTGCAGCCA GCTCAGGCTC TCTCCTCTTG CCGTCGCACA AATGGCGCAG
CGCGGTGAGA ACCAATATGT GGGATGTGCC TGCGGGATCA TGGATCAGAT GATTAGCGCC
TTAGGTGAAC AGGATCATGC CCTACTCATC GATTGTGAGG ACTTAGACAG CGAACCGGTT
CATATACCCG ATAGCCTGAG CCTCATCATA GTCAATTCCA ATGTTCAGCG TGGATTAGTC
GATTCCGAGT ACAACCTGCG CCGCGAACAA TGCGAAGAGG TGGCAAGCCA TTTTGGACTT
GATTCCCTGA GACACCTTGA ACTTTCTCAG CTTGAAGCCG CAAAATCTGA GCTGTCGGAT
GTCTGTTATC GACGTGCCCG ACATGTGCTT ACCGAGAACA GACGAACTCA GAATGCCAGT
CACGCTCTGG AAGCCGGGAA TATCACCACC TTGAGCGAGC TCATGGCTCA ATCCCATGCA
TCTATGCGAG ATGACTTTGA GATCACGGTG CCTCAAATCG ATACTCTGGT AGAGATAATC
TCTGATGTTA TCGGCACCCG TGGCGGTGTA AGAATGACTG GCGGCGGCTT TGGTGGCTGT
GTGGTTGCTC TCGTTGACCA TGATCTGACC GATGCCGTAG TCGAAGCCAT TGAAGCTGAG
TACCCTAAAC AGACAGGACT GGAACCCACT GTCTACCTCT GCTCTGCCAG CGATGGGGCC
ACCCGAATCG AGAAAGATGT CTATTAG
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| Protein sequence | MSNPAQRANK LFVQTFGTTA DDLYLAPGRV NLIGEHTDYN DGFVLPAAIN FHTIVAVKRR
EDDIYRAVSD AFPGEIKEWA FGQEGVMTSE DGWVNYLKGF TAAMAASGLP AKGLDIAVVG
NVPLGAGLSS SAALELAFGT AVNDCSQLRL SPLAVAQMAQ RGENQYVGCA CGIMDQMISA
LGEQDHALLI DCEDLDSEPV HIPDSLSLII VNSNVQRGLV DSEYNLRREQ CEEVASHFGL
DSLRHLELSQ LEAAKSELSD VCYRRARHVL TENRRTQNAS HALEAGNITT LSELMAQSHA
SMRDDFEITV PQIDTLVEII SDVIGTRGGV RMTGGGFGGC VVALVDHDLT DAVVEAIEAE
YPKQTGLEPT VYLCSASDGA TRIEKDVY
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