Gene Ssed_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4014 
Symbol 
ID5611919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4914165 
End bp4914503 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID640934969 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001475746 
Protein GI157377146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000995556 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACAGCAG ATACGATGCA AGATGAATTT CTGTTAGTGA TGACAACTTG CCCCACTAAA 
GACTCAGCCA CCGAGCTGGC GAAAGCTTTA GTCGAGGCGA AAATTGCCGC TTGTATACAA
ATTTCCGCTC CGGTGACTTC AATCTATAGC TGGGAAGATG AGATCAGTGA AGAGAGTGAA
TTTGCCCTGC ATATCAAATG CATGGCAAAG AACTATCCTG CCCTCGAGAA TAAGGTCAAG
CAACTGCATC CCTATCAAGT CCCGGAACTC ATTGCAGTCT CTCTGACTAA CGGGTTACCC
GCTTATTTTG ATTGGATAAA AGAAACCACA ACACCATGA
 
Protein sequence
MTADTMQDEF LLVMTTCPTK DSATELAKAL VEAKIAACIQ ISAPVTSIYS WEDEISEESE 
FALHIKCMAK NYPALENKVK QLHPYQVPEL IAVSLTNGLP AYFDWIKETT TP