| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4002 |
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| Symbol | |
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| ID | 5611148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4900105 |
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| End bp | 4900887 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934956 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475734 |
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| Protein GI | 157377134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00752041 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATAACA TTTTAAAAAT TGCTCTACCC ATCGTAATCG GCTGCAGCTG TAGTGTTAAC
GCAATAGCAA AAGACTTTAC TACGGTGACT GCCGGCTATA TTGCTCATGC AAGTGATACG
TTAGACGAAA ACAAAAACCA ATTTGATAGA ACTCTGATCA CAGTGGCAAA CGTACGTGCT
AAAGATTGGG GTAGAATAGC CACTGTGGGT ATCTTCGAAA ACTTAGAGCA GTCGTCATCA
GATCCACAAG CTGAAGCACT CGGCGAAGCT TGGAGTACCT TTAAATTTGC CGGCGTAGCA
CACATAAAAA CGGGCTTTGT TCCCAGCCTT AACTACATGG TTGATGAGTT CTTTTTTACT
AACACCAATG GTTATGAAAA CAACATGAAG CTAGGCCTGT CCTATGATAT GAAGCTTGGT
GATGCCAAAG CCAATATCGG AGCAGGCGTC AACTATGTCA GTATCGATAA TGCAGGCGCT
AAATTCACTG GCTTTTCCGG CTATGCTTTG AATGCATCAG TGCAATACCC AATATCGGAT
AACTGGGGGC TCAAGCTCCT ATACAATGGC GTATTTGATC GTGATGAAAA GCATGCCGTT
GGCTATACCG ATAGCCTAGA TGGCAAGCAG CATGACTCTG GGTATCGTCT CGATTTAGCC
GTGAATTATA AAATTTCTAA CGCCATCTCA GCGTGCCTGA CCCTTAGACA ACTCGATAGC
TGGTACGGAT ACAAAACGAG TAAAGCAGAT ATGATGGTAC TGACGACTTC AATCACTTTC
TAG
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| Protein sequence | MNNILKIALP IVIGCSCSVN AIAKDFTTVT AGYIAHASDT LDENKNQFDR TLITVANVRA
KDWGRIATVG IFENLEQSSS DPQAEALGEA WSTFKFAGVA HIKTGFVPSL NYMVDEFFFT
NTNGYENNMK LGLSYDMKLG DAKANIGAGV NYVSIDNAGA KFTGFSGYAL NASVQYPISD
NWGLKLLYNG VFDRDEKHAV GYTDSLDGKQ HDSGYRLDLA VNYKISNAIS ACLTLRQLDS
WYGYKTSKAD MMVLTTSITF
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