| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3990 |
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| Symbol | |
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| ID | 5610460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4883183 |
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| End bp | 4884736 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934944 |
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| Product | sulfatase family protein |
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| Protein accession | YP_001475722 |
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| Protein GI | 157377122 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3119] Arylsulfatase A and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAACA AATTAACCAA GTCAGCGATC GCCTTAGCAG TTGTTGCCTC TAGCGGTGTG
TCAGCAGCAT CAACTCAGCC TAACGTCGTT GCCATCATGT TAGATGATGT CACCACCATG
GATATCTCCG CATATCACCG CGGCTTAGGT GCAGTCAGTA CGCCTAATAT CGACCGAATT
GCCGAGCGCG GCATGATGGT GAGTGATTAC TATGCTCAAG GCAGTTCAAC TGCGGGTCGC
TCTGCCTTTA TCACTGGCCA ATATCCTATT CGAACCGGCT TAACCTCTGT TGGACAACCG
GGCTCGACCC GCGGCCTGCA AAAAGAGGAC CCGACCCTAG CGGAAATGCT CAAAGACAAA
GGCTATGCCA CCGTACATGT GGGTAAGAGT CACCTGGGTG ATAACAATGA CCACCTACCA
ACTGTGCATG GCTTTGATGA GTTCTACGGC TTCCTCTATC ACCTCAACGT GATGGAGATG
CACGAGCAGC CGGAGTTTCC TAAAGATCCC AACTTTAAGG GGCGTGGCCG CAACATGATC
CATACTGTCG CGACCGATAA GTTTGACGAC ACCGTCGACC CACGTTTTGG TGTGATCGGT
AAGCAAACCA TTAGCGACCA AGGTGAACTG GGAGCTAAGC GGATGCAGAC TGTCGATGGT
GAGTTCTTAG ATTTTGCTAT CAACTGGCTA GAAAAGCATG AAGCAACGAA TGACGACCAG
CCATATTTCA TGTGGTACAA CCCAACGCGT ATGCACCAGA AAACCCATGT GCGCCCTGAG
TATCAAGGTG CTAGCCAACA TAATACCTAC TATGACGGTT TAGTTGAGCT CGATGATCAA
ATTGGTGTGC TTCTCGACAA GCTAGAAGCG ACCGGAGAGA TAGACAACAC CATCATCCTA
TTTACCTCCG ACAACGGTGT GAATCTGGAC CATTGGCCTG ACTCCGGAGC GGCGTCTTTC
CGTGGCCAAA AAGGTACCAC TTGGGATGGC GGCTTCCGCG TACCAATGTT AGTGAGCTGG
CCAGCCAAGA TCCCTCAAGG AGAATATACC GATGGTTTGA TGTCTGCCGA AGATTGGGTG
CCAACGATTA TGGCTGCGGC GGGTGACGCG GATATCAAGC AAGACTTGCT AACAGGCAAG
AAGATTAACG ACGAAACCTA CAAGGTGCAT ATCGATGGTT ATAACCAACT GGATATGCTG
ACTGAGGGTG GCAAGAGTAA TCGACATGAG TTCTTCTTCT ATAACGAGAA TAGCTTAAAT
GCATTCCGTG TTGATGAGTG GAAAGTACAC CTTAAAACCA AAACCGAATG GATTGCCCCT
GCAGATGAGT GGCCATTGGG CATGATCCTC AATATTAAAG CGGATCCGTT TGAGCGCTCT
CCTGATACCC GCGGTTGGTT CCTCTGGATG AAAGAGAAGA CTTGGGTACT GCCAAAGCTA
CTTAAAGCAG TTGGTAAACA TCAGCAGTCA CTTAAAGCCT TCCCTCCTCG TTTAACAAAC
GGCGGCATTG GTATGAACGA CAAGTCTGTC GTTGAAGAAA AGAGCAACAA ATAA
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| Protein sequence | MVNKLTKSAI ALAVVASSGV SAASTQPNVV AIMLDDVTTM DISAYHRGLG AVSTPNIDRI
AERGMMVSDY YAQGSSTAGR SAFITGQYPI RTGLTSVGQP GSTRGLQKED PTLAEMLKDK
GYATVHVGKS HLGDNNDHLP TVHGFDEFYG FLYHLNVMEM HEQPEFPKDP NFKGRGRNMI
HTVATDKFDD TVDPRFGVIG KQTISDQGEL GAKRMQTVDG EFLDFAINWL EKHEATNDDQ
PYFMWYNPTR MHQKTHVRPE YQGASQHNTY YDGLVELDDQ IGVLLDKLEA TGEIDNTIIL
FTSDNGVNLD HWPDSGAASF RGQKGTTWDG GFRVPMLVSW PAKIPQGEYT DGLMSAEDWV
PTIMAAAGDA DIKQDLLTGK KINDETYKVH IDGYNQLDML TEGGKSNRHE FFFYNENSLN
AFRVDEWKVH LKTKTEWIAP ADEWPLGMIL NIKADPFERS PDTRGWFLWM KEKTWVLPKL
LKAVGKHQQS LKAFPPRLTN GGIGMNDKSV VEEKSNK
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