| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3986 |
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| Symbol | |
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| ID | 5613517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4877720 |
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| End bp | 4879105 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934940 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001475718 |
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| Protein GI | 157377118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5361] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC GAATTCTCTA TCCACTTATC TGCTCTGCAA TGAGTGTATT TAGCACGTCA
GCAGTAACGG CAAACACAAT TGATCCTGAA GAGGAGCTAG CCTACAACTT AGGTATTCAG
GCTTTTATAT ATGGTGCGGG TCCGTTAACA ACCTCACAAG TGAGAAAGAC ATCCACTACA
ACATCTGTCC CGCTGAATAA TGGCATGGCT CCAATGAATC AGATGGGGAA AACCCTTAAG
CTTTCGGGGC CTGAAACCAG AATTGTACCG ACCGTCAATA ACGATACACT CTATTCTCAG
TCACACATCA ACCTAAATGA GACTGGGCCA TTGGTGATTG AAGTACCAGT GACAGATAAC
CGTTATTTCA TCGTGCAGTT ATTGGATAAT TATACCGAAT CGGTCGAGAA TTTAATTACC
GAAAATGTCG GCACTCAAGG CGGTAAATTT CTGTTAGTCA ATAAAGGATG GCAGGGGGAT
GTCCCTGAAG ATATTGACAG AGTAATTGAA TCTAGAACAC CTTTCGTCTG GTATATTCAA
AGAGTTGGCG TTGCAGGAGA GCGAGACTTA AAAGCGGCGA ATAAGGTAAA TGCTGGTTTT
ATTAACTACC CGTTAACTCA GCTAGGCCAG CCTCAAGAGC CTGTACAGCT AAGTCAAGCA
ACGGGTGGCA TCCCTCCGAT GACCCGGCCT GAAGGGCTGG ATTGGTACAA ACTCATTGAC
CAGGAGCTAC GTAATAATCC GATATCATCA GATTCACCCA TTGTAGATCA GTTCAAGTAC
ATCAATATTG GACAGGCTCA ACCGTTCGAT GAGGAGAACC TATCTGAAGC GCAAAAGCGT
GGCCTGATGC GCGCATTGAG CTCTGCACAG CAAATAATCT CATATGCAGG TCGTGACTTA
GGCGTTAAAA ATAACGGCTG GTCGATGATG TATGAAGGGG GTGTATATGA AACAGACTAC
CTCAGTCGTG CCAGTATTAA CTTTAGAGCA GCAGGCCTAA ACACCAAAGA GAGAGCCCTG
TATCCAAACC GTTATACCGA TTCTAATGAG CAACAATTAG ATGGTAAGTA TGAATACAGA
ATGACTATGC CTGCAGATGC ACCAGCAAAA GCGTTTTGGT CAGTGACCAT GTATGATGCG
AAAGATCTCT ATATGATTGA AAATCCAATT GATCGTTACT CCATTTCAAG CAATCGACCT
GACGAACTAG TTTATAACCG GAACGGTACG TTAACCCTGT GCATCCAACA TAAGCAACCA
ACCGAAGCCA ACTGTAACTG GTTACCCGCT CCTAAAGACG ATTTCTATCT TCACATGCGC
TTGTATGAAC CAAGTGAAGC AGTATTAAAA AACCAATACC AATTACCTGA AGTCTTTAAG
AAGTAG
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| Protein sequence | MKKRILYPLI CSAMSVFSTS AVTANTIDPE EELAYNLGIQ AFIYGAGPLT TSQVRKTSTT
TSVPLNNGMA PMNQMGKTLK LSGPETRIVP TVNNDTLYSQ SHINLNETGP LVIEVPVTDN
RYFIVQLLDN YTESVENLIT ENVGTQGGKF LLVNKGWQGD VPEDIDRVIE SRTPFVWYIQ
RVGVAGERDL KAANKVNAGF INYPLTQLGQ PQEPVQLSQA TGGIPPMTRP EGLDWYKLID
QELRNNPISS DSPIVDQFKY INIGQAQPFD EENLSEAQKR GLMRALSSAQ QIISYAGRDL
GVKNNGWSMM YEGGVYETDY LSRASINFRA AGLNTKERAL YPNRYTDSNE QQLDGKYEYR
MTMPADAPAK AFWSVTMYDA KDLYMIENPI DRYSISSNRP DELVYNRNGT LTLCIQHKQP
TEANCNWLPA PKDDFYLHMR LYEPSEAVLK NQYQLPEVFK K
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