| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3985 |
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| Symbol | |
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| ID | 5614149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4876511 |
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| End bp | 4877188 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934939 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475717 |
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| Protein GI | 157377117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAT TACTATTATC ATCTTGTATC ATGGCAATGG CCATGAGTGC CAGTCAGACT
GTCGCGGCCG AAGAGAGCCA ATTTACAACA TCTGGAGTGA TGATGGGATT GAGCAACTAC
CTTTGGCGTG GACAGACAAT CAGTGATGAT AAACCATCAC TCCAAGCCGA TCTTATGGTC
GAACATGACA GCGGGTTTTA TTTGGGAACC TCATTTGAGA CCTATCGTTA TGAGGACTCG
GATACTGTGG TCAAGGATTA CGAGATCGAC TACTACGGCG GCTATTACCT GATGGCCACT
GACGATCTTG GCTTTGGCTT CAATGCCATG AAGTACACCT ATGGCGATGG CGGCGACACT
GTGGAATATG CACTATCGGT AGATTATCAG GCAATGAATC TGGCGGTTAA TTACGATCAG
GATGTAGAAA CCTGGTATAC CGAATTAAAT TACTCATTCC AACTATTTAA CGGCAGCAGC
CTGGTAGCAC ATGCGGGTCT GTTTACCGAT GCCGAAGCCT ATGAGTTTGA TGACAATGGC
AAAGTGGCTG ACACTGCCTA CGATGTCGCA CTGCGTTACA GCTACCCGCT GCTGTCACAG
CTGGATCTGA TGCTGGAAGC CAGCTATCAC GAGTTTAACG ATGACCACTA TATGGTTGGA
TTAGCGTATA ACTTCTAA
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| Protein sequence | MNKLLLSSCI MAMAMSASQT VAAEESQFTT SGVMMGLSNY LWRGQTISDD KPSLQADLMV
EHDSGFYLGT SFETYRYEDS DTVVKDYEID YYGGYYLMAT DDLGFGFNAM KYTYGDGGDT
VEYALSVDYQ AMNLAVNYDQ DVETWYTELN YSFQLFNGSS LVAHAGLFTD AEAYEFDDNG
KVADTAYDVA LRYSYPLLSQ LDLMLEASYH EFNDDHYMVG LAYNF
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