| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3976 |
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| Symbol | |
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| ID | 5611061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4863558 |
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| End bp | 4864739 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934930 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475708 |
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| Protein GI | 157377108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACAA CCGTTAATCG GTACTCATTG CCGTTGTGCT CCCTGCTGTT ACTCACCTCA
TCAGTTGTTA CCGCTTCAGA ATGGCAATTA AGCGGGTTTA TTGGTCAAGG TTTTGTTGCC
GGTGAAGATA CCCAATTTAT CGTTGGAGAG GATAGCAGCA CATTTGATAT CACCGAAGCC
GCATTCGCCG TGTCGTGGAA ACCTATAGAG CATGTTCGAT TCGCGAGTGC ATTGACTTTC
AGGCAGTGGG GGACGCTGTC TGAGGCTGAT GTCATGTTTG ATTACCTGTT TGCCGAGTAT
AGCCACCAAG TTGGGGAGGG GATGCTGGGT ATTCGTGCCG GACGATTTAA AAATGAAACC
GGTTTCTACT CCAGCACCCG TGATGTCCCG TTTACGCGTC CGAGTATCAT GCTCCCTCAG
TCTATTTACA GCGATTATTT CCGTGACGCG CAGCTGCATA TCGAGGGGGG AGATCTCTTT
GGTATGCATC AGGTGCTCGA TGGGGTTGTC GATTGGCACA TCTCGGTCGG TCAGGTAAAT
GTGACCGAAG ACTTAGATCG TAATGTGATG GGAAGTACGG ATTTTGGTGA GTTTAGTGCA
GAGGATTACT ACTCCGGGGA TATAGAGTTT CAAAATGATT ATTTACGCTT AGGTGTGAGT
TATTATGATG CTGAGATTAG TTTCGATCCC TTCATACCCG GTTACTATTA CCCTGGTGAT
ATCCGGTTAA AAAATTGGGT GTTTTCAGGA CAGTTCAGAT ATGAGCGACT CGAACTAACT
GCCGAGTACC TCAAAGGTGA CAGAGTGACG AATGGGCTTG TAGCCCCAAT AGAAGCTGAT
GACCTGTACG ACCCCAGTGT TGGTTACTAT ATTGACCTGA GAGCATACCT CCCTAATGAG
GTGGAGTTGT TCGTTCGATA TGATAAGCAT ATCGATAACA CCGATGATCC GGATGGGACA
AATTACGAGG CCGTATACGG TTCACCCGCT TACTTTGGTT ATACGAAAGA CTGGACTTTC
GGTGCTCGCT GGTTTCCAAG CAATGATTGG TTACTCGCGG TTGAATATCA TGATGTTGAA
GGGGCTTCCT GGGTAACGCC TATTGTCTCT CCGGATCCTC TGACTCAGGC GAAGCATTGG
TCTCTGTTTG CTCTGCAACT CTCATATCGC TTCCAGTGGT GA
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| Protein sequence | MFTTVNRYSL PLCSLLLLTS SVVTASEWQL SGFIGQGFVA GEDTQFIVGE DSSTFDITEA
AFAVSWKPIE HVRFASALTF RQWGTLSEAD VMFDYLFAEY SHQVGEGMLG IRAGRFKNET
GFYSSTRDVP FTRPSIMLPQ SIYSDYFRDA QLHIEGGDLF GMHQVLDGVV DWHISVGQVN
VTEDLDRNVM GSTDFGEFSA EDYYSGDIEF QNDYLRLGVS YYDAEISFDP FIPGYYYPGD
IRLKNWVFSG QFRYERLELT AEYLKGDRVT NGLVAPIEAD DLYDPSVGYY IDLRAYLPNE
VELFVRYDKH IDNTDDPDGT NYEAVYGSPA YFGYTKDWTF GARWFPSNDW LLAVEYHDVE
GASWVTPIVS PDPLTQAKHW SLFALQLSYR FQW
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