Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3970 |
Symbol | |
ID | 5614207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 4856335 |
End bp | 4856910 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640934924 |
Product | protein of unknown function DUF335, SprT |
Protein accession | YP_001475702 |
Protein GI | 157377102 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAGT TATTCAAATC TGTGACGAGT ACCGATCCGT CTCCCGATAG CGTTTCGACT CTCAAGCCGC ATACACCTGC CTGCTATGAA TTTGATGCTG AACTTCACAC TCGTGTCGCT CAGCAGGTGC TGGAGTGCTA TCAAATAGCC GAAAAGCATC TGAATCTTCA TTTTCCACGT CCGGAAATCA ACTTCAAGCT AAGAGGAAGA AGCGCCGGAA CGGCTCACCT GCAGCTCAAT AAACTCAGGT TTAACCCGGT ACTGCTCGCT GAAAACAGTG ATGCCTTTCT TAAAGAGGTG ATCCCACACG AGATCTGCCA TCTGCTCGCC TATCGGCTCT ATGGCAAGGT AAAACCCCAT GGCAAAGAGT GGCAGTCCCT GATGGTCGGT GTCTTTGGAG TTCAGCCAAG TACGACCCAT AGTTTGGATA CTCAATCGGT CGACGGACAA AGATTCGATT ATCACTGTGG ATGCGGACCC GTAAAACTCA GTATCAGACG TCATAACAAG GTCATACGGG GCGAGACTCA ATATAGATGC AGGCGATGTA AGAGAGAGTT AACCAGGGCA GCTTAG
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Protein sequence | MFKLFKSVTS TDPSPDSVST LKPHTPACYE FDAELHTRVA QQVLECYQIA EKHLNLHFPR PEINFKLRGR SAGTAHLQLN KLRFNPVLLA ENSDAFLKEV IPHEICHLLA YRLYGKVKPH GKEWQSLMVG VFGVQPSTTH SLDTQSVDGQ RFDYHCGCGP VKLSIRRHNK VIRGETQYRC RRCKRELTRA A
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