| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3960 |
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| Symbol | |
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| ID | 5613114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4840015 |
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| End bp | 4840431 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934914 |
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| Product | nitrate reductase cytochrome c-type subunit (NapB) |
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| Protein accession | YP_001475692 |
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| Protein GI | 157377092 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3043] Nitrate reductase cytochrome c-type subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0359336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAATG TACTCACTAT AGCCGCGCTC GTCATGGCGC TTAGTGCCTG CTCTGGCCAG
CAAGCAAACA CTCAAGCGGA GCCGGTAAAT GTCAGCTCAC TTGGCAAGTC TGAGATCACC
GATGTTCGTA TGGCCGATGC AATGCCTACG TATCCAAAGC GTGGCGCATC GATCGAGCGT
GGCTTTGTAC ACCAGCCACC TCTGATCCCA CATAAGGCTG AATACGCCAT TACAACCAAG
AAGAATAAGT GTTTAAGCTG TCACTTCCCA GCCAAAATGA AAGCGACCCC TATCGATGAG
TCGCACCTGT TGGCTACGGG TAAGCTAAAT AACATCTATT ACAACTGCTC TCAGTGTCAC
GTACCACAAG CCGAGAACAA ACAGCAGTTA GTAGAGAACG ACTTCTCGAA TAAATAG
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| Protein sequence | MKNVLTIAAL VMALSACSGQ QANTQAEPVN VSSLGKSEIT DVRMADAMPT YPKRGASIER
GFVHQPPLIP HKAEYAITTK KNKCLSCHFP AKMKATPIDE SHLLATGKLN NIYYNCSQCH
VPQAENKQQL VENDFSNK
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