| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3958 |
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| Symbol | napG |
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| ID | 5613858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4838379 |
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| End bp | 4839113 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934912 |
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| Product | quinol dehydrogenase periplasmic component |
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| Protein accession | YP_001475690 |
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| Protein GI | 157377090 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR00397] MauM/NapG family ferredoxin-type protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0389498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAGG TGAAACACAC TAAATCAAAT CCACGGGACG TAAATCGTCG CCAGTTCTTA
GCCTCCTCGG CTAAGGCGGG TTGTGTGATG GGTTTAGTGG GGCTGGGGAT CACAGCAACG
GCGACACAAT CGCGACAGCT TGATTCCTTA GCGATCCGAC CTCCTGGCGC CTTAGGCGAG
GATGATTTTC TCTCGGCTTG TGTTCGTTGT GGTTTATGTG TCGAGGCTTG CCCCTACGAC
ACCCTGAAAC TAGCGCGCTG GTTCGATGGC GCAGCAACGG GCACACCCTA TTTTACGGCG
CGTAACATCC CCTGTGAGAT GTGCGAAGAT ATTCCCTGTG TGAAGGTGTG TCCATCGGGC
TCACTCGATC ATGGTCTCGA GAAGATTGAA GAGGCCAAAA TGGGTATCGC CGTATTAATC
GATGAGAAAA ACTGCCTTAA CTTCAAGGGA CTTAGATGCG ACGTCTGTTA CCGGGTTTGT
CCGTTAATCG ACGATGCTAT CACCCTGGAG CGGCAACATA ACCAACGCAG CGACCATCAC
GCCATGTTCC TGCCTACAGT CAACAGCGAC ACCTGTACCG GCTGTGGTAA GTGTGAACAT
GTGTGTGTAC TCGAAGAATC TGCGATTAGG ATATTGCCGG CACATATCGC CTTAGGAAAA
ACGGCTGAAC ACGATACTTA TATCAACACA GAAGAGACCA CACTCGAGAT GTTAAACAAG
GGCCTATCAC TATGA
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| Protein sequence | MSKVKHTKSN PRDVNRRQFL ASSAKAGCVM GLVGLGITAT ATQSRQLDSL AIRPPGALGE
DDFLSACVRC GLCVEACPYD TLKLARWFDG AATGTPYFTA RNIPCEMCED IPCVKVCPSG
SLDHGLEKIE EAKMGIAVLI DEKNCLNFKG LRCDVCYRVC PLIDDAITLE RQHNQRSDHH
AMFLPTVNSD TCTGCGKCEH VCVLEESAIR ILPAHIALGK TAEHDTYINT EETTLEMLNK
GLSL
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