| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3956 |
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| Symbol | |
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| ID | 5613856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4835499 |
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| End bp | 4835753 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934910 |
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| Product | NapD family protein |
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| Protein accession | YP_001475688 |
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| Protein GI | 157377088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3062] Uncharacterized protein involved in formation of periplasmic nitrate reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0156334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAGG AATACCATGT CACCAGCTTA GTCGTGCATG CCGCACCGAA AGCGGTTTCT
CAGGTTGAAA CCAACATTCG AGCGCTTGTC GGTGCCGATA TACACGCCGT TACCGATGAA
GGTAAGTTTG TCGTCACCCT CGAAGGTGAA ACACAAGCCG CTATACTGGA TAACGTCGAA
GCCATTAATG CCCTCGAAGG AGTGTTAAAC GCCAGTCTGA TTTACCATCA AGTCGATCCA
ACAGAAGAAA GTTAA
|
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| Protein sequence | MSQEYHVTSL VVHAAPKAVS QVETNIRALV GADIHAVTDE GKFVVTLEGE TQAAILDNVE
AINALEGVLN ASLIYHQVDP TEES
|
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