| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3934 |
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| Symbol | |
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| ID | 5612917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4804723 |
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| End bp | 4806096 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934888 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001475666 |
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| Protein GI | 157377066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAG AGAACACTTT GACGACTTCT ACTAATACCC AAGAAACAGC AGCCAATGGC
ATTGCTCCTA ACGCCTCATT TTTGGCACTA CTCCCCCTTT TTCTATTCCT GGCCCTATTT
ATTGGTGCCG GCGTCTACTT CCAGAGCCAG GGCGTTGATT TTGCGTTTTA TCAACTTCCC
AGCGTTATCG CGATTTTGCC AGCCATTATC TTTGCGCTCA TCATCTCGAA ACAGAAGCTC
AACCAAAGCA TAGATACCTT TATTGAAGGT ATCGGTCATT CAAACATCAT CGCTATGTGC
CTTATCTACC TGTTAGCCGG CGCATTTGCA TCCGTAGCCA AAGCAACCGG TGGCGTGGAT
GCCACTGTGG CACTGGGCCT ATCTTTAGTT CCGTCAAACT TGCTACTACC CGGGTTCTTC
GTCATCGCCG CCTTCATTGC GACCGCCATG GGAACCTCTA TGGGCACGAT TGCCGCCGTG
GCACCGATAG CGCTAGGCGT GGCTAACGAA GCCCAGATTG AATTGGCCAT AATGGCCGGT
GCGGTAATAT CGGGCGCTCT GTTTGGCGAT AACCTCTCTA TCATCTCGGA TACCACGATT
GCGGCGACGC GTACCCAAGG TTGTGAGATG AAAGATAAGT TCAGAGAGAA CCTAATCTTC
GCCATTCCAG CCTCTATCAT CACCTTAATC GTCTTCACAT TAGTCGGTCA GGGTCAAGCT
GATGTAGCGC CACAAGAGAT AGATTTTATC AAGGTAATCC CTTACCTCAC CATTTTAATC
TTGGCGGTAT CTGGCTTAAA TGTATTCGTC GTGCTCACGA TAGGTATTTT ATTGGCAGGT
GTCACCGGCT TATTCACCAT GGATTATGGT CTGATACAAT TCGGTCAGGA TATCTATACC
GGTTTCACCA ACATGCAGGA GATCTTCATT CTCTCTATGC TCGTCGGCGG ATTGGCGGCG
TTAATGCAGC AACAGGGCGG TCTTACCTTT GTCAGCGAGC AGATTGAGAA ACTGATCACA
CGTTTCTCTA AAGCCAAAGG CGAAGCATCG ACTCGCGCAT CGGAGCTGGG TATGGCCGGC
ATTGTAGCCT TGACCAACAC CTGTGTGGCC AATAATACCG TCTCTATCGT TGTCACGGGT
GACATAGCTA AAGATCTGGC TCAAAAACAT GAGGTGACAC CTAAGCGCGC CGCCAGCATC
ATGGATATCT TCTCCTGCAT AGTGCAAGGG CTGATCCCCT ATGGCGCACA GGCACTGCTG
GTCGCTTCAA TCTTTAGCAT CTCACCGCTG CAAGCTGTCA CTCACGCCTG GTACTGCATG
ATCTTAGCCG TTGTCGCTAT CTCTATCGTT ATTTTACGTA AGCGAACTGC TTAA
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| Protein sequence | MKRENTLTTS TNTQETAANG IAPNASFLAL LPLFLFLALF IGAGVYFQSQ GVDFAFYQLP
SVIAILPAII FALIISKQKL NQSIDTFIEG IGHSNIIAMC LIYLLAGAFA SVAKATGGVD
ATVALGLSLV PSNLLLPGFF VIAAFIATAM GTSMGTIAAV APIALGVANE AQIELAIMAG
AVISGALFGD NLSIISDTTI AATRTQGCEM KDKFRENLIF AIPASIITLI VFTLVGQGQA
DVAPQEIDFI KVIPYLTILI LAVSGLNVFV VLTIGILLAG VTGLFTMDYG LIQFGQDIYT
GFTNMQEIFI LSMLVGGLAA LMQQQGGLTF VSEQIEKLIT RFSKAKGEAS TRASELGMAG
IVALTNTCVA NNTVSIVVTG DIAKDLAQKH EVTPKRAASI MDIFSCIVQG LIPYGAQALL
VASIFSISPL QAVTHAWYCM ILAVVAISIV ILRKRTA
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