| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3916 |
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| Symbol | tnaA |
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| ID | 5610215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4784049 |
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| End bp | 4785446 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934870 |
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| Product | tryptophanase |
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| Protein accession | YP_001475648 |
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| Protein GI | 157377048 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3033] Tryptophanase |
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| TIGRFAM ID | [TIGR02617] tryptophanase, leader peptide-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTCCGGAACC TTTTCGTATC AAGATGGTTG AGTCAATTAA AATGACTAAC
CTTGAAGACA GAGAGCAAGC CCTGACCCAG GCGGGTCTCA ACCCCTTCCT GCTTCGCAGT
GAAGATGTCT ATATCGATCT GCTCACCGAC TCCGGCACCG GCGCAATGAG TGATGTGCAG
TGGGCGGGAC TCATGATGGG GGATGAGTCC TATGCGGGTA GTCGTAACTA TTTCAACCTG
TGTGAATCTG TAGAACATTT CTTTGGTTAT AAACTCACAG TGCCCGTTCA TCAGGGGCGC
GGCGCCGAGC AGATATTGTT TCCCTGCCTG ATAGAGCGGA TGAGGCAGGT ACGCGGTGGC
ACCGAGCCGA TATTTATCTC TAACTATCAT TTCGATACCA CGGCGGGTCA TATCGAGATG
AACGGCGGCA AGGCGCTCAA TGTCGTGACC GAAAAGGCGT TCGATACCGA GAGTTACTAC
GACTGGAAGG GGGACTTCGA TCTTGATAAG CTGCGCGACA CCATAGCTAC CTATGGTGCC
AACAATATCG CCGCCATCAT CACAACAGTG ACCTGTAATA GCTCCGGCGG GCAACCTGTC
TCTATGGCGA ACATGCGTGC CGTCTATGAG ATCGCTCAGA AACATGACAT ACCGGTCGTC
ATCGACTCAG CCCGATATTG TGAAAATGCC TATTTCATCA AGCAGCGTGA GCCGGGATAT
GAAGATAGCT CCATGTTGGA GATCATCCGT GAGATGTTCC AGTATGGCGA TATGCTTACC
CTGTCGGCGA AGAAAGATCC CATGGTTAAC ATAGGCGGGC TCTGCTGTGT GCGTGATCAT
GAAGAGTTAT TCAGAGCCGT GCAGACACGA TGCGTGCCCA TGGAAGGGTT TGTCACCTAT
GGCGGCATGG CCGGCCGTGA TATGGAGGCG TTGGCCAGAG GCATGCATGA AGGCGCCGAT
GAAGACTTTC TTCATTACCG TGTCTGTCAG GTAGCCTACC TGGGGGAGCG TCTTCGCGAG
GCGGGGATCC CAATTCAATA TCCCACGGGA GGGCATGCGG TGTTTGTCGA CGCCGCGAAG
ATGTTACCCC ATATTCCAGC CCATCAGTTT CCCGCACAAT CTCTGTGTAA TGCCCTCTAT
CTCGAGGCGG GCATTAGGGC GGTAGAGATT GGTTCATTGC TACTTGGACG CGAGCCTGAA
ACCGGTGAGC AGAAGGTGTC ACCTATGGAG TTGATGCGAC TCACCATTCC GCGCCGGGTT
TATACCAATG ATCATATGGA CTATATCGCC GATGCGCTCA TCGCCATCAA AGATCAGGCG
GCGTCGCTTA AGGGGTTAAC CTTCGATTAC GAGCCGCCGG TATTGAGGCA CTTTACCGCT
AAGTTCAACT CTCTTTAG
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| Protein sequence | MKRIPEPFRI KMVESIKMTN LEDREQALTQ AGLNPFLLRS EDVYIDLLTD SGTGAMSDVQ
WAGLMMGDES YAGSRNYFNL CESVEHFFGY KLTVPVHQGR GAEQILFPCL IERMRQVRGG
TEPIFISNYH FDTTAGHIEM NGGKALNVVT EKAFDTESYY DWKGDFDLDK LRDTIATYGA
NNIAAIITTV TCNSSGGQPV SMANMRAVYE IAQKHDIPVV IDSARYCENA YFIKQREPGY
EDSSMLEIIR EMFQYGDMLT LSAKKDPMVN IGGLCCVRDH EELFRAVQTR CVPMEGFVTY
GGMAGRDMEA LARGMHEGAD EDFLHYRVCQ VAYLGERLRE AGIPIQYPTG GHAVFVDAAK
MLPHIPAHQF PAQSLCNALY LEAGIRAVEI GSLLLGREPE TGEQKVSPME LMRLTIPRRV
YTNDHMDYIA DALIAIKDQA ASLKGLTFDY EPPVLRHFTA KFNSL
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