| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3911 |
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| Symbol | |
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| ID | 5610019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4778636 |
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| End bp | 4779295 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640934865 |
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| Product | aromatic acid decarboxylase |
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| Protein accession | YP_001475643 |
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| Protein GI | 157377043 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.713745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTACC CAAGAAAAAC GAAGTCTATC AGTCTGGCTT GGACCGGCGC CTCGGGGGCA
CCTTACGGCC TTAAGCTGCT GGAGTGTCTG CTTGCTGCCG ATTATCAGGT GTTCCTGATG
ATCTCCTCTG CCGCTAGAAT AGTGATGGCT ACCGAGCATG GCTTGCAGTT GAGTGCTAAC
AGTGACAAGG CAAGGGACCA GCTGCTCGAG CTGTTTAGTG AACAGGGCTC CGATATCACC
GGATTGCTGC ATGTTCTGGG CAAGGAGGAG TGGTTTTCCC CTCCGGCCTC AGGCTCGGCT
GCGCCTAAGC AGATGGTGAT CTGTCCCTGT AGCACGGGAA CGTTAGCGGC CGTGGCAACC
GGAATGAGCA ATAGTTTGCT CGAACGCGCC GCCGATGTGG TAATAAAAGA GCGCGGCCAA
TTGATCTTGG TTCCCAGAGA AACCCCCTTT AGTTCTATAC ATTTAGAACA TATGTTGTCG
CTCTCACGTC TGGGGGCGAC CATCATGCCT GCGGCACCGG GCTTTTATCA TGATCCCAAA
TCGATACAAG ATCTGGTAAA CTTCATGGTC GCCCGGATAC TTGACCATCT GGGCGTTGAA
CACGAATTAA CGAATCGCTG GGGCTATGAT AAGCATAATA CCAGTGACAG CGACAATTAA
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| Protein sequence | MSYPRKTKSI SLAWTGASGA PYGLKLLECL LAADYQVFLM ISSAARIVMA TEHGLQLSAN
SDKARDQLLE LFSEQGSDIT GLLHVLGKEE WFSPPASGSA APKQMVICPC STGTLAAVAT
GMSNSLLERA ADVVIKERGQ LILVPRETPF SSIHLEHMLS LSRLGATIMP AAPGFYHDPK
SIQDLVNFMV ARILDHLGVE HELTNRWGYD KHNTSDSDN
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