| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3910 |
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| Symbol | |
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| ID | 5610018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4778087 |
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| End bp | 4778617 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934864 |
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| Product | hypoxanthine phosphoribosyltransferase |
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| Protein accession | YP_001475642 |
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| Protein GI | 157377042 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.835811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACA CCATCGAAGA GATGATCTCT ACCCAAGAGA TAGACGAGAA ACTGGATCTG
TTGGCCGAGC AGATCAATGC TCATTACGCT AACAGCGAGC GCCTGTTAAT GGTGGGTTTG
TTGAAAGGCT CAGTTGTGTT TATGGCTGAT CTTTGTCGCC GTATTAAAGG CCATGTTGAG
ATCGATTTCA TGTCGGTATC CAGCTATGGC AATGCGATGA CCAGTACACG TGAAGTTAAA
ATTCTTAAAG ACGTGCAATC GGATATCCAG GGACGCGATG TGCTTATCGT AGAAGACCTG
ATCGACTCGG GTAATACCCT CAATAAGATC CGTGAGATGC TTTTACTCCG CGATCCTAAG
AGTCTGGCGT TATGTACGCT ACTCGATAAG CCTGAACGTC GTGAAATCGA AGTACCCGTA
GATTTCATCG GTTTTACTAT TCCCGATGAG TTTATCGTCG GCTACGGTAT CGATTACGCC
GAGCAGTATC GAAATCTGCC TTACATCGCT AAGGTTATCC CGCAAGAGTA A
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| Protein sequence | MKHTIEEMIS TQEIDEKLDL LAEQINAHYA NSERLLMVGL LKGSVVFMAD LCRRIKGHVE
IDFMSVSSYG NAMTSTREVK ILKDVQSDIQ GRDVLIVEDL IDSGNTLNKI REMLLLRDPK
SLALCTLLDK PERREIEVPV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVIPQE
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