| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3897 |
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| Symbol | |
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| ID | 5611282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4766380 |
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| End bp | 4767657 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934851 |
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| Product | aminopeptidase B |
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| Protein accession | YP_001475629 |
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| Protein GI | 157377029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0260] Leucyl aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000551018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.710949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGT TAATGAAAGT AAGCCTTAGT AAAGAGGCTC CAGCTGCTCA CTGGGGTAAA
GCCGATGTGA CATTTCAAAA TGATCAGGCG GTTATTCACC TGCAAGGTGG AGATGAGCTA
AGACAAGTTC AGAAAGCCGC GCGTAAACTG CGTAGCCAAG GCATCGCTTC ACTTTCATTA
GAGGGCGAGT TGTGGGATCT GCATTCTCAG TGGGCTTTTG CTCAAGGGTT CGCCACGGCA
AAGTCTAATT CTGATATCCG TTGGACCGGG GATGAGGCAA CACAAGTCGA ACTTAAAAAC
AGACTCGACA GTGCCAGCTT TGCCCGACAA TTGATCAATG AAACGCCTGA AAACCTTGCG
CCTGTGAAGT TGGCTATACT TGCCGCCCAT TGGTTATCTG AGATAGGCGG AGAGAAGGTG
ACTTACCGCA TCATCGAAGG TGCCGAGCTG CTCGAAGAGA AGTGGGTTGG GATCCATGCC
GTTGGTCGCG GAAGTGAGCG GGCACCGGCT ATGTTAGAGC TTGATTATAA CCCTTTGGGG
GATGATGCTC CGGTATCTGT GGCCTTGGTC GGTAAGGGGA TCACGTTTGA CTCTGGTGGT
TATAGCATTA AAGCCTCTGA AGGCATGCTA GGGATGAAAT GCGACATGGG TGGCGCGGCT
ACCGTGGCGG CAGCGCTCGG GCTTGCGATG AAGCAAGGCT TGAACAAGCG AGTTAAATTG
TTCCTTTGTT GCGCCGAAAA CCTGATCAGT GGTCATGCTT ATAAGTTAGG AGACATCTTA
ACTTACAAGA ATGGCGTCTC TGTCGAAGTG GTCAATACTG ACGCTGAGGG ACGTTTGGTA
TTAGCCGATG GATTGCAGGC GGCTTCTGAA ACGGGCGCCT CTTTAATTAT CGATGCGGCC
ACCTTAACTG GTGCGGCCTT GATGGCAGTG GGAACTAACT ATAACGCTAT CTTCTCGCCA
TCAAGCGAAG TGTTGGCGAT GGCGCAAGCC AAAGCGACCG AAGTGGGTGA GCGAGTTTGG
CCGCTGCCAC TGGATCCCTG GCATCGTGAG ATGTGTCCAT CGGCCTATGC CGATACCGCT
AACAGTCGCC CCATGAAAGG GGGCGGTGCC GGTGGAGCGT CTAATGCAGC GGGCTTCCTT
TGGCATTTTG TTACGCCTGA GGCTAACTGG TTGCATATGG ATCTAGCCTC GGCTTTTGCC
GATAGCGCCA ATGCATTGTG GGCTGCCGGT GGAACGACAC ACGGTGTGCT GACTATCGCA
AATTTACTGC AGGATTAA
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| Protein sequence | MTELMKVSLS KEAPAAHWGK ADVTFQNDQA VIHLQGGDEL RQVQKAARKL RSQGIASLSL
EGELWDLHSQ WAFAQGFATA KSNSDIRWTG DEATQVELKN RLDSASFARQ LINETPENLA
PVKLAILAAH WLSEIGGEKV TYRIIEGAEL LEEKWVGIHA VGRGSERAPA MLELDYNPLG
DDAPVSVALV GKGITFDSGG YSIKASEGML GMKCDMGGAA TVAAALGLAM KQGLNKRVKL
FLCCAENLIS GHAYKLGDIL TYKNGVSVEV VNTDAEGRLV LADGLQAASE TGASLIIDAA
TLTGAALMAV GTNYNAIFSP SSEVLAMAQA KATEVGERVW PLPLDPWHRE MCPSAYADTA
NSRPMKGGGA GGASNAAGFL WHFVTPEANW LHMDLASAFA DSANALWAAG GTTHGVLTIA
NLLQD
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