| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3885 |
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| Symbol | |
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| ID | 5613479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4742912 |
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| End bp | 4746586 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934839 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475617 |
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| Protein GI | 157377017 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00122982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.551295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT TGAATCGAAT TGTGCTTATC GATACGCACC TACCCGGCGT AGTGGAACTC
GCCCTCGACG GCCACACGAA TATCTGTGGT ACCAATGCCT CAGGAAAGAC CACGCTTCAG
CGTCTGGTCC CGGTTTTTTA TGGTGAGTAT CCAAGTCGAG TCGTGCCCTC TACCCGTGAT
AGCTTCGAGC GTTGGTACCT GCCCCATGAT TCAAGTTTTA TCATCTATGA ATATAAACGC
GATGATGGCC AGTTAAATCA AGCGGTTCTG GCCTCTGCCG GTGATGGTAA AGGGGTTAAT
TATCGTTTCA TCGCTAAGGG CTTCGAGCTT GAAGATTATG TGAAGTCAAA AAATGGCGAC
ACAGTGCTTT GCCATACCAT GGCGGAGCTG GGCAGGGAGA TGAAGCGTGC AGGCGTCGCG
GTGACTAATC TGCTCAATAC CCGGGAATTT CGCGCCATCA TTCAAAATGA TCGTGCCCTG
TTGAGTACCG GAAGTAATCG CACCGAGCTT CGTACCTATG CGAGGCAGTT TTCATTATGT
GAATCCGAGC ATTCACTGCG TCATATCGAA AAGTTAGCCA AGGCGGTGCA CTCGAAAGAG
GGCAAGATGG AGACAATAAA ATCGATGGTC GCCGCCATTT TGGAAGAGGA TGGTGTTAAT
CCGCCGAGCT CCCGCCTGAA TCCTCAGCGC GTCGAAGCCT GGATACGAGA CAGCCAGCTT
ATTCAGGGAT TCGAGCAGAT CCGCCCGGAA TTTGAAAAGC TTGAGCAGGA GTTTAATCAA
CTCTTGAGCG CCGAGCTGCG CCTTGCGAGT CTTAAACGTG GCTACAGTAA AGATGAAACC
ACAGAGGTGG AGCGTCAGGA GCATAACCAG GACCTTTCTA AATCCCTCAA TGGTGAGTTA
AGGCAGTTAG ATGATGAGTG GAAAGAGCTG CGCGATGAGC TCAGTTTAGA TCTATCGGCC
GCGAAGGGTG ACGTTGCTAA GTGTGAGTAT GAGTTAGACG CGATAGAGGA CCAACACGGC
GCCTTCTTAG ATGCAGATAT CGAACAGGCC AAACTGGACT TAGAGCAGCT ACCCAATTGG
CGTGGCAGTC TTGAGAACTT AACCGAGCGC CATAAGCTGC AGACTGAGAA GCATCAGGAT
ATCGAAGCGG CATACAATGC CCGTCGCAGT AAAATTGGTG AGGGGCTCAA CCGGGAACTG
GAAAACCTGC ATCAGGCTCA AGATAAGCAG CGCGAAGCCA GAGACAAGCA GCGTGAACAG
GGTCGAAGCG AGCTGGAGGC GTTGGGGGGT CAATGGCGCG AGCAGATGGA CAGTGGCCGT
GAAAAGTTCC AACAAGAGGA ATATCAACTT AAGTTATCGA CAGCCGAACT TAAGGTGCGT
GTCGATAGCG TGACCTATAC CGAAGAGGAA AAGCTGGCAT TGGCCGTGTT CGATGAGCGG
ATCACACGGG CCGATGAAGA TCAGGAAGTA TGCAATGCCA AGGTCGACAG GTTAACCATT
GAGGAGCGTA AACTTCGTGC CAAGCGAGAC CAGGCCAATG AGAGCCTGCG TCTGGCCGGT
ATTCGCGTGA CAGAGCGCCA GAGTGAGCTC GACGAGCTGC ATCATATCCT GTTTCCTCAA
TCTCATACTC TGCTTGAGTT TTTACGCAAA GAAGCCGATG GCTGGGAGAA CACCATAGGT
AAGGTGATTA ACCCAGAGTT GTTACATCGC AGCGACCTGC ACCCGGCCAT GCTCAGCGAT
AATTTAGAGG CCATCTACGG AATCAACCTG GATCTTAAGG CTATCGAGTC GCCGGAATAT
GCATCTTCGG AGCAAGAGTT ACGTATTCGT CATGCTAAGG CCGAAGAGGC GTTACTCGGC
GCCAAAGAGT TGCAGGCCGA GGCCGAAGAT AGCCTGGTCG CCATCAATGC TGAATTGGAT
GGATTGACCC GGGAGCTGAC CTTTGCCCGT ACGGCATATA AGAACAGTCG TGACGATCTT
CGTCGCCTGT TCGATGAGAA GCGCGCCGAG CAAGATAAGA TCAATAAAGC ACTCAAGGAA
CGAAAATCAG AAGCGCAGAA GAAGCTGAGT CGTTTAGACA GTGATATCAA GCAGCTGAAG
CATCAACACC AGGAATGGCT TGAAGAGCAA AAAGAGCAGG CATTAGAAGC CAGAATGGAG
AAAAATGCCT ACTGGCAGGA GGTGGTTGGC GCGTTAGACT CTCAGTTGGA GCAGACAAAG
GAAAATATTC AACACAGGCG CGATCACGCT AAGAGCGAGC TTAAGGCCTG TGAGCAATGG
TATAAGAACG AGCTTAAATC CCGCGGCGTC GATGAAGATA AGATCCTGGC GCTTAAGCAA
GAGATCCGGG GACTGGAGTC GAGTATCAGT AAGGCTGAGC AGCGTCGTAA CGAGGTACTC
AGATATGAAG ATTGGTATCA GCATACCTGG TTAATGCGTA AGCCTAAGTT GCAAACAGAG
CTGAGCACAG TTAAGCATGC GACCTCAGAG CTCGAGCAGC AACTCAAATC TAAAGCCAAT
GAAGTTAAGG CGAAAAGGCA GGAGCTGGAC AGCCAGCGTA AGCAATCTGA TGCCATACAG
GTAGAGGCAT CGGAGAACTT AACTAAGCTG CGTAGCGTGA TGCGTAAGCT TAGCGAACTT
AAATTGCCGG CAAGTAATGA TGACGCTCAA GGGGGGCTCA CCGAACGTCT GCGGCAGGGT
GAAGAGCAGC TACTGAAAAG AGACAGTTTA TTAGGCTCGG TTAAGCAGTA TGTGGAGCAT
TTCGACTCGG TTATCGCCAG TAAGTCAGGC TCGAGTCTGT CTGAGACCTG GGAGCGGGCT
CGTGAAGAGT CGAGCTTTGT AAACGATAAA GGGATCCGTC TGCTGGATTA CCGCAAGCTG
GTTCCTCAAC TCGAACAGCT GCTCAATGTG ATGGTGCCGC AATCGATTAT GGCGCTTCGC
GAACAGGGGC GAATTTTTGG TGTCGATCTC ACCGCATTTT ACGATGTACT GGCCGATATC
GATCGCCGCA TCGCCTCACA AAGTGCGCGG ATCACCCGTG AAGTGGGTGA AGAGCTGTTC
CTCGATGGCG TTTCCGAGTC GGCGGTTAAG ATCCGCTCTC GGATCAGCGA GCTGGAGTTC
TGGCCTGAGT TGGAGGAGTT TGTTAAGGCC TTCCGTCAGT GGAAAGCCGA TGGATTCAGT
GAACTTCCCG ATGAAAACTA CACCAATAGC ATGCGCCGAG CCCTGGATAT TATCGGCCGA
GCCGCACTCT CCGGTGGTAT CTCCAAGCTG CTCGAGATTG AGTTGAGGCT AAAAGAGGGC
AATAGCGATC TGGTGATCCG CACCGATCGT CAGCTCAATG AGTCTTCCAG TCACGGTATG
GCGTATCTGA TCTTATGTAA GTTCCTGCTG GCATTTACCC GCCTGCTACG TGGCCGCTCG
AATGTCACGA TTCATTGGCC TATCGATGAG CTTGGCACCT TGCATCATGG CAACGTAAAG
AAGATCTTCG ATGCCTGTGA AAACAACAAT ATTTCCGTTT TGGGCGCCTT CCCCAACCCT
GAGTCTGAGG TACTTAACTT GTTTGCTAAC CGATATATCA TCAATAAACA GACCAGGAAA
CTTCAGGTGG TGAAGCCTCA GGCTAATCCC ATCGCAGATA AGTTGAATAA ACGATTCGCA
AGGGAGGCGG TGTAA
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| Protein sequence | MPSLNRIVLI DTHLPGVVEL ALDGHTNICG TNASGKTTLQ RLVPVFYGEY PSRVVPSTRD
SFERWYLPHD SSFIIYEYKR DDGQLNQAVL ASAGDGKGVN YRFIAKGFEL EDYVKSKNGD
TVLCHTMAEL GREMKRAGVA VTNLLNTREF RAIIQNDRAL LSTGSNRTEL RTYARQFSLC
ESEHSLRHIE KLAKAVHSKE GKMETIKSMV AAILEEDGVN PPSSRLNPQR VEAWIRDSQL
IQGFEQIRPE FEKLEQEFNQ LLSAELRLAS LKRGYSKDET TEVERQEHNQ DLSKSLNGEL
RQLDDEWKEL RDELSLDLSA AKGDVAKCEY ELDAIEDQHG AFLDADIEQA KLDLEQLPNW
RGSLENLTER HKLQTEKHQD IEAAYNARRS KIGEGLNREL ENLHQAQDKQ REARDKQREQ
GRSELEALGG QWREQMDSGR EKFQQEEYQL KLSTAELKVR VDSVTYTEEE KLALAVFDER
ITRADEDQEV CNAKVDRLTI EERKLRAKRD QANESLRLAG IRVTERQSEL DELHHILFPQ
SHTLLEFLRK EADGWENTIG KVINPELLHR SDLHPAMLSD NLEAIYGINL DLKAIESPEY
ASSEQELRIR HAKAEEALLG AKELQAEAED SLVAINAELD GLTRELTFAR TAYKNSRDDL
RRLFDEKRAE QDKINKALKE RKSEAQKKLS RLDSDIKQLK HQHQEWLEEQ KEQALEARME
KNAYWQEVVG ALDSQLEQTK ENIQHRRDHA KSELKACEQW YKNELKSRGV DEDKILALKQ
EIRGLESSIS KAEQRRNEVL RYEDWYQHTW LMRKPKLQTE LSTVKHATSE LEQQLKSKAN
EVKAKRQELD SQRKQSDAIQ VEASENLTKL RSVMRKLSEL KLPASNDDAQ GGLTERLRQG
EEQLLKRDSL LGSVKQYVEH FDSVIASKSG SSLSETWERA REESSFVNDK GIRLLDYRKL
VPQLEQLLNV MVPQSIMALR EQGRIFGVDL TAFYDVLADI DRRIASQSAR ITREVGEELF
LDGVSESAVK IRSRISELEF WPELEEFVKA FRQWKADGFS ELPDENYTNS MRRALDIIGR
AALSGGISKL LEIELRLKEG NSDLVIRTDR QLNESSSHGM AYLILCKFLL AFTRLLRGRS
NVTIHWPIDE LGTLHHGNVK KIFDACENNN ISVLGAFPNP ESEVLNLFAN RYIINKQTRK
LQVVKPQANP IADKLNKRFA REAV
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