| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3884 |
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| Symbol | |
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| ID | 5613478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4742259 |
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| End bp | 4742912 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934838 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475616 |
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| Protein GI | 157377016 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.978239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAGA TGACAGAAAC CGCAATCGTC GGAACGGGCG CCATCATAGA ACGTCTGCTT
AAGGGAGAGT TTATCTGCCG AACGACCGAT GAAGAAGCCT GGCGTTCACT GAAAAATTCA
ACCACTAAAG AGCGGGTCGA AACCTATCTG AACCAGATAA ATCGGACCAT AGGTTCGGCG
GGAGAGGGAG AGGTGTTCTT CTGCGGTTAT CTGCAGTTGG GTGAAAAGGA GCGCAAGGTG
ATCTCCTCTC AATTCAGAGA TATCTGTAAT GCACTCATTC CCCTGGTCGA ATGGCTGGTG
CTGGTACAGG AGTCCAGTGG GCAAGATGCC CCCCTGTCGG AGGGAGCCGC GGTACGCTTA
ACTGAGCTGC AAACCCGCAT AGAAGACACG CCGGCATTTA GAGAGCAACT GGCTAAGATA
AGCCATTACC GTCTGTTTGG CTCGACCAGT AGCAACGTCG ATGCCCAGAT TAAATTGGTG
TTCAAACGTC TGGTCGAGTT GGGCTATCTT ACCCGCCCCA ATACCGAGAA GCAGATCTTT
ATCGCCACCG GCAAGTTAGA TTATCTCTAT GAGGTTATCC GTTTTATCGA TGAAACCGAA
GGGCTGAGCC TGGAAGCACA GGCTGAGACC GCGACCCAAA GGGATCTGGT TTAA
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| Protein sequence | MSEMTETAIV GTGAIIERLL KGEFICRTTD EEAWRSLKNS TTKERVETYL NQINRTIGSA
GEGEVFFCGY LQLGEKERKV ISSQFRDICN ALIPLVEWLV LVQESSGQDA PLSEGAAVRL
TELQTRIEDT PAFREQLAKI SHYRLFGSTS SNVDAQIKLV FKRLVELGYL TRPNTEKQIF
IATGKLDYLY EVIRFIDETE GLSLEAQAET ATQRDLV
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