| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3873 |
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| Symbol | |
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| ID | 5611602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4726590 |
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| End bp | 4727225 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640934827 |
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| Product | cAMP-regulatory protein |
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| Protein accession | YP_001475605 |
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| Protein GI | 157377005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000105148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGA TTGGTAAGCC TAAACCGGAT CCTACTTTGG AATGGTTTTT ATCACACTGT
CACATTCATA AGTATCCAGC CAAAAGCACT TTGATCCACG CTGGTGAAGA ATCGGATACG
CTTTATTACA TCGTTAAAGG TTCTGTCGCT GTTTTGATCA AAGACGAAGA AGGCAAAGAG
ATGATCCTCT CTTACCTGAA TCAAGGCGAC TTCATCGGTG AACTTGGTCT GTTTGAAGAG
CAAGCCGAAC GAACTGCTTG GGTACGTGCT AAGCAACCTT GTGAAATTGC AGAAATATCT
TACAAGAAAT TTAAGCAGCT TATCCAGGTT AACCCTGAAA TTTTGATGAA GCTTTCTTCT
CAGATGGCAT ATCGTCTGCA TAGCACCAGC CAGAAAGTTG GTGATCTTGC ATTCCTTGAT
GTCGCAGGAA GAATCGCTCA AACATTATTA CATTTGGCAA AACAGCCTGA TGCAATGACT
CACCCGGATG GCATGCAGAT CAAGATCACT CGTCAAGAGA TTGGTCAAAT TGTTGGTTGT
TCACGTGAGA CTGTGGGACG TATTCTTAAG ATGCTTGAAG AGCAAAGCCT GATTCAAGCT
CACGGTAAAA CAATCGTGGT TTACGGCACG CGCTAA
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| Protein sequence | MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEESDT LYYIVKGSVA VLIKDEEGKE
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQPCEIAEIS YKKFKQLIQV NPEILMKLSS
QMAYRLHSTS QKVGDLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQSLIQA HGKTIVVYGT R
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