| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3867 |
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| Symbol | |
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| ID | 5609676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4717252 |
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| End bp | 4718139 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934821 |
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| Product | phosphoribulokinase |
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| Protein accession | YP_001475599 |
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| Protein GI | 157376999 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3954] Phosphoribulokinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAA AACATCCCAT CATCGCAGTT ACCGGTTCAT CTGGAGCGGG TACGACGACA
ACGACAACGG CCTTTAAGCA TATCTTCCGT CAACTCGGGA TCAATGCAGC TTCGGTCGAA
GGTGACAGCT TTCATCACTT TACCCGCCCT GAAATGGAGT TAAAGATCCG CAAGTCTAAA
ACCGAAGATA AAAATATCAG CTACTTTGGT CCGGAAGCGA ACGACTTTGA AAGATTAGAG
CAATGTTTCA GCGACTATAG CGCGACGGGT CAAGGCGAAA CCCGTGCATA CCTACATACC
TTCGATGAAG CTGTTCCGTT CAACCAGATG CCGGGAACAT TTACCCAATG GCACCCTTTA
CCGGAAAATA CCGATATGCT CTACTATGAA GGGCTTCATG GTGGAGTGAA AACCGACAAC
TGCAATGTCG CAGAACATGT CGACCTGCTG ATAGGGATGG TTCCGATCGT CAATCTGGAG
TGGATTCAAA AGATCATTCG AGACACGTCT GAAAGAGGCC ACAGTCGTGA AAAAGTAATG
GGCTCGATCG TACGTAGCAT GGACGATTAC ATTAACCATA TGACCCCCCA GTTTTCTCGC
ACCCACATCA ACTTTCAGCG TGTTCCGACG GTGGATACCT CGAATCCGTT CAGTGCGAAA
AATATCCCCA GCTTAGATGA AAGCTTCGTT GTGATCCGCT TTCGTGGGAT CAAGAATGTA
GACTTTCCCT ATTATCTGAA GATGATCGAT GGTTCATTTA TGTCCAGGGT CAATACGCTT
GTAGTACCGG GAGGCAAGAT GTCTCTGGCT ATGGAGTTGA TATTAACTCC CTTGATCAGA
GATCTATTAG AGAAACGTCA GCAGCTTTTA TTGCTGGATA ATGAATAG
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| Protein sequence | MSAKHPIIAV TGSSGAGTTT TTTAFKHIFR QLGINAASVE GDSFHHFTRP EMELKIRKSK
TEDKNISYFG PEANDFERLE QCFSDYSATG QGETRAYLHT FDEAVPFNQM PGTFTQWHPL
PENTDMLYYE GLHGGVKTDN CNVAEHVDLL IGMVPIVNLE WIQKIIRDTS ERGHSREKVM
GSIVRSMDDY INHMTPQFSR THINFQRVPT VDTSNPFSAK NIPSLDESFV VIRFRGIKNV
DFPYYLKMID GSFMSRVNTL VVPGGKMSLA MELILTPLIR DLLEKRQQLL LLDNE
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