| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3865 |
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| Symbol | |
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| ID | 5611605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4715919 |
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| End bp | 4716890 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640934819 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001475597 |
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| Protein GI | 157376997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACT CTTTTTCACC TCCATGGTGG GCAAAAAGCC CCCATGTTCA GACTATTCTA
CCGGTATTCA CCAAGGTGGA CAGACCAGTG CTGAGCCGAG AACGTCTTGA GCTCAGTGAC
GGAGATTTTA TCGATCTGGA CTGGTTAAGC TTTCCCCAAG ATAGCCAAAA TATTCTGGTT
ATCATTCATG GGCTGGAAGG TAGTGCCGAC TCTCATTACG TACGCAGGAT CTTGCAGGAG
TGCCGCGATA GAGATCTATG TGCAGTCGTT CACCATCACA GAAGCTGCTC AGGAGAACCG
AATCGTCTGG CCCGAAGCTA TCATAGTGGT GATACCCAAG ATCTGCAGAC ACATCTGACC
CACTTAAAGT CGCGATATCC AAATTCAAAG ATAAGGGCCG TAGGTTACAG CCTCGGCGGC
AACGTACTGA CTAAATATCT GGGCGAGCAT GATGAGGCGA GTCTCATCGA ACGTGCCGTT
GTAGTATCGG CACCGTTAAA ACTTGCAGCA TGCGCTAAGA GGTTGGAAAG AGGATTTTCC
AAGGTTTACC AAAGCTACCT GATAAAGCAG TTACAGCAGA AACTCACCGA AAAGGTCAAA
GACAAACAGC TTGGACAGAG CATGCCGATC TCGATGTCGC AGATAGATGA GCTCAACACC
TTCTATAGCT TCGACCATAG AGTAACGGCT CCGCTTCATG GGTTTACGGG AGTGGATGAC
TACTACCATA GAGCCAGCGG TATGGACTAC CTAAAACATA TTCGTCAGCC TACGTTAGTC
ATACATGCAG AGGATGATCC TTTCATGACC CGGGACGTGA TCCCAGCCGC AGATAAGTTG
TCTCCTCAGG TGGTCTATGA ACTGCATAAT CGCGGTGGAC ATGTCGGCTT TATCGAGGGT
GGCACACCAT TAAAACCTAA ATACTATCTG GAAAGGCGGA TCCTCACCTT TCTCTCACAC
AGTGGTACCT AA
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| Protein sequence | MTHSFSPPWW AKSPHVQTIL PVFTKVDRPV LSRERLELSD GDFIDLDWLS FPQDSQNILV
IIHGLEGSAD SHYVRRILQE CRDRDLCAVV HHHRSCSGEP NRLARSYHSG DTQDLQTHLT
HLKSRYPNSK IRAVGYSLGG NVLTKYLGEH DEASLIERAV VVSAPLKLAA CAKRLERGFS
KVYQSYLIKQ LQQKLTEKVK DKQLGQSMPI SMSQIDELNT FYSFDHRVTA PLHGFTGVDD
YYHRASGMDY LKHIRQPTLV IHAEDDPFMT RDVIPAADKL SPQVVYELHN RGGHVGFIEG
GTPLKPKYYL ERRILTFLSH SGT
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