| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3858 |
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| Symbol | |
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| ID | 5611650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4707677 |
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| End bp | 4709296 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934812 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475590 |
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| Protein GI | 157376990 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.997252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATA CGATAAATAT AAGCGTACCT TACAGGAAGC TAGTGCTTGC CTGTATGATC
AGCATGTTGG TGGCTTGTGG CAGTGATGAC CCAGCTCCAA CTCCTGAGCC TCCGTTACCG
CCGGAGAATA CCGCTCCGGT TGCCAATCCA AACGAAGCGG CAACCATTGT GGGAACCAGC
ATACTAATCG ATGCCCTGGC AAACGATACT GATGCAGACG GTGATGCACT GACCATAGAA
ACGGTGACGC TGATTGACGG CACCGGAAGC GCAAGCATCG AAAACAACCA GATCCGATTT
ACTCCGGATA AAGTCGGCAC CACCACACTG AACTACACCA TTAGCGATGG TAACGGGGGC
GTGGCCGAAT CAGGGATCAC TATAACCGTT ACCTCTGATG CCTCTGTTAC ACTGAGTTAT
GTCGGTACAG AGACCTGTAT CGCCTGTCAT ACCGATAAGA AGACCTATTA TGAGACCGGC
CATAACTTTA AGTTGACTAA AATTGTAGAT GGTAAGGAGC CTGTGTATCC ATTTACAACT
CTCGATGGTT CCTTAGAGGT AATGGACGGA GTCACTAACA CTCTGGGTAA ACCAGAGAGC
TGGGCAGATA TCAGCTATGT TATCGGTGGC TATAAAAAAG TCGCTCTGTT TATCGATGCG
AATGGTTACA TTATCAATGG TACAAATGTG ACGGCTCTTG CTGCGCCTTT AGGTGAGAAA
GTGACTAAGA TGTTCCCAGA GTATCCTGAC AAGGCGCCGG ATGGAAGCCC GTACGGTTAC
TGTGGCAGAT GCCACACAAC AGGTTGGGAA GATTACACCG AAGGTGCCGG TGATAACCGA
AACCTGAACA GACAAGATGA TCTGCCGGGA ATGGACGGCA CGTTCGCTAT GACCGGAGTT
CAGTGTGAGA GTTGTCACGG CGCCGGTAGT GAGCATGTTA AGGGTCCATC AAAAAATAAC
ATTGTTAGGA TAGCAGAAGC ACGCGTTCCT GGAGATTTCA CTGCAGATGA TATGGGATAT
GGTAAGGCGG CTGCCTGTAT TGAGTGTCAT ACCACAGATG ACGCCGTCAG ACGTTACCCG
GACTATGAGT CTCCTTTCGA GCAAAAGTTT GGAGCACCTA GCCTGGGTGC ACGCTTGAAG
AGGGATGACC ACACCTTTGG CCCCGAAGGC CGTCGTGATG GCCGTGGTGG TCGTCATGCG
GCTTCAACCC TGATCGGTGC CGATCCGGAC ACTGGCGAAC TTATGGGTAA GAAGAAGGAC
TTCACCTGCT CAACTTGTCA TAATCCTCAC CGGTCTGAAC ACTATCAAGA TAAGCCGGGT
CACGAAGATG CCATGGTGCG CGAGTGTACC GATTGTCATG ACAAGGAATT TGCCAATGTG
ACGGGATCTA ACTTAGCCTC TGCGGCCCAC GAGTTCATCG CTGAGTGTAA AGATTGCCAT
ATGCCAAGCG AATCTCACCT CTTTAAGATC GATCTCGAAG GGGTAAAGGA AGACCCAAGA
CACTTCTCCG CAGACGGCGA GTACATGAAG CCGTGGCTTC GTGCCTACGA CAGTTGTTCT
GGCTGTCATG AGGAGGACTA TGACTTGAGA GCCGCGAAGA TAGGACAAAT TCATAAGTAA
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| Protein sequence | MMNTINISVP YRKLVLACMI SMLVACGSDD PAPTPEPPLP PENTAPVANP NEAATIVGTS
ILIDALANDT DADGDALTIE TVTLIDGTGS ASIENNQIRF TPDKVGTTTL NYTISDGNGG
VAESGITITV TSDASVTLSY VGTETCIACH TDKKTYYETG HNFKLTKIVD GKEPVYPFTT
LDGSLEVMDG VTNTLGKPES WADISYVIGG YKKVALFIDA NGYIINGTNV TALAAPLGEK
VTKMFPEYPD KAPDGSPYGY CGRCHTTGWE DYTEGAGDNR NLNRQDDLPG MDGTFAMTGV
QCESCHGAGS EHVKGPSKNN IVRIAEARVP GDFTADDMGY GKAAACIECH TTDDAVRRYP
DYESPFEQKF GAPSLGARLK RDDHTFGPEG RRDGRGGRHA ASTLIGADPD TGELMGKKKD
FTCSTCHNPH RSEHYQDKPG HEDAMVRECT DCHDKEFANV TGSNLASAAH EFIAECKDCH
MPSESHLFKI DLEGVKEDPR HFSADGEYMK PWLRAYDSCS GCHEEDYDLR AAKIGQIHK
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