| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3845 |
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| Symbol | |
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| ID | 5611700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4686967 |
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| End bp | 4687512 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934799 |
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| Product | SH3 domain-containing protein |
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| Protein accession | YP_001475577 |
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| Protein GI | 157376977 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3103] SH3 domain protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000383374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000226441 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTACTCT CTCCCAGCCT GCTGGCTGAA GGCCAACCCC GTTATATCTC AGACCAGGTA
TACCTCTATC TTCATGGCGG TCCCGGAACC CAATACCGTA TTTTAGGCAG CATTGAAGCT
GGACAGGCGA TCTCTGTACT GGGTCAAAAA GAGGGAGATT ACTCCAAGAT CATCGACCAC
AAAGGCCGCG AAGGCTGGAT TGAAACTAAG ATGATTAGCG CTAAGAAGAG CTTCCGTGAG
CAGTTACCGG AAGTTCAGGC CGAACTCGAC AAAACCAAGG CTGAACTCGA ACAGATTATT
AACTCCAGTG ACAGCAGTCT TCAGGAGCTT CGTACGCTCA AGAGCCAACT CGCTCAGGCA
GAAAAGTCTC TCGAGCAGGC CAGCACAGAG CGTGATATAG CAACGACTAA GCTTGCCAGC
ATTGAAAAAA ATGAACGCTT TCAGATGTGG CAGGAGGGTG GACTTATTGC CGCTGCAGGC
CTGATACTGG GTATTATCTT GGTCTACCTA CCAAGACCCA GACGTAAGCA GAAGAACCGC
TGGTAA
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| Protein sequence | MLLSPSLLAE GQPRYISDQV YLYLHGGPGT QYRILGSIEA GQAISVLGQK EGDYSKIIDH
KGREGWIETK MISAKKSFRE QLPEVQAELD KTKAELEQII NSSDSSLQEL RTLKSQLAQA
EKSLEQASTE RDIATTKLAS IEKNERFQMW QEGGLIAAAG LILGIILVYL PRPRRKQKNR
W
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