| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3826 |
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| Symbol | |
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| ID | 5613274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4662914 |
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| End bp | 4664134 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934780 |
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| Product | AFG1 family ATPase |
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| Protein accession | YP_001475558 |
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| Protein GI | 157376958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1485] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000483505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGCTC CCGGACTGAG GGAGCTGATA TACTCCCTTT CTCATTATTT ATGCAGATAC
CACCCAATGA CTTTATCGCC ACTCGAACGG TACCGGAGAC GATTAACCCA ATCAGGCTTT
GCCTATGATC CGATACAGGA GCGAGCGATT GAGCAATTGG ATAGCTTGTT TAAGCAGATC
ATCGCTTTTC CTCACCCCGC AAAGTCAACA GATTCAAGGT TAAAGGGTCT CTATATTTGG
GGGGATGTTG GTCGCGGTAA AACCATGTTG ATGGACCTAT TCTGTGAGGC GGTATCTGAC
TCGGGGACTC AACCACCGCT AAGATTACAC TTTCATCGCT TTATGGCACG TATTCATAGG
GAGTTGTTGC AAGAATCGGG TCACAGAGAA CCACTAGCGC GCATAGCAAA ACGCATCTCG
AAGGAGTGCA GGCTTATCTG TTTCGATGAG TTCTTCGTCT CCGATATCGG TGATGCCATG
ATCTTGGGTA ATCTTTTTCA CGCCCTGTTC AAAGAGGGGA TTCTATTGGT CGCAACGTCG
AATATTCCGA TACGGCGTCT CTATGAAAAC GGATTACAGA GGGAGCGGTT CGAGCCGAGT
ATCGAGCTTT TACAGCAATC GACCCGGGAG ATTCATCTTG ACGGTGAGGC CGACCACAGG
TTACGTCGAC TCACTTTTAA GCAGAGCTAT TTTATTAATG CCCATACCGA CACAGATGCT
CTGTTTACAA AATTAAATTC CGGAGCAGGA TATCAAAGTG AACCGTTAAT CATCTTAGGT
CGCCCGATTG AGATCATAAA ACGGGCGGGA CGCCTTCTAT GGCTGGATTT TAATTCACTC
TGTAACGGGC CCAGATCTCA GCTCGATTAT ATTGAACTGG CGAGTCAATT TACCACGGTA
CTGTTAAGTG ATATTCCGGT GTTGGGCGGA GAAGCCAAGT CCTGGATAAG AGCCAGAGGT
ACAGAAGATG GTGCACTGGC GACCAAAACC GGTGAGAGAC AACTTTCCTA TGCCATCGGG
GACGACCCAG CAAGACGCTT TATTGCATTA GTCGATGAGC TTTACGATCA AGGAGTCAGC
CTCTACCTGA CCGCAGAAGT CCCTCTGGAA CATCTATACA GCCAAGGCGC GCTCTCCTTC
GAATTCAGGA GAACATACAG CCGTCTTCAA GAGATGCAGT CACATGAATA CACCAAAAGC
TCAAAAAGAA TGCCGTCTTA G
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| Protein sequence | MIAPGLRELI YSLSHYLCRY HPMTLSPLER YRRRLTQSGF AYDPIQERAI EQLDSLFKQI
IAFPHPAKST DSRLKGLYIW GDVGRGKTML MDLFCEAVSD SGTQPPLRLH FHRFMARIHR
ELLQESGHRE PLARIAKRIS KECRLICFDE FFVSDIGDAM ILGNLFHALF KEGILLVATS
NIPIRRLYEN GLQRERFEPS IELLQQSTRE IHLDGEADHR LRRLTFKQSY FINAHTDTDA
LFTKLNSGAG YQSEPLIILG RPIEIIKRAG RLLWLDFNSL CNGPRSQLDY IELASQFTTV
LLSDIPVLGG EAKSWIRARG TEDGALATKT GERQLSYAIG DDPARRFIAL VDELYDQGVS
LYLTAEVPLE HLYSQGALSF EFRRTYSRLQ EMQSHEYTKS SKRMPS
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