| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3821 |
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| Symbol | |
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| ID | 5613281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4653466 |
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| End bp | 4655190 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934775 |
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| Product | potassium/proton antiporter |
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| Protein accession | YP_001475553 |
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| Protein GI | 157376953 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000259426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000169781 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGCTG AAACAATTAA TAATTTTTTT CTTATCGGTG CGCTGTTAAT TGCAGTGAGT
GTACTTTTGA GTGCGGTTTC TTCTCGTGTC GGTATTCCTA TCCTGTTAGT CTTTCTCGGT
GTAGGTATTA TGGCTGGAGA AGACGGCCCC GGTGGGATAC ATTTCGATGA CTATTCCGTT
GCTTACCTGG TCAGCAACTT AGCCCTGGCC GTTATTTTGC TCGATGGCGG TATGCGCACT
CGCGTCTCCA GTTTCAGGGT GGCCCTGTGG CCGGCACTCT CCTTAGCCAC ATTTGGCGTG
GCTATTACGA CGGGCCTGAC GGGAATGATG GCCGCCTACT TGTTTGACCT CAATATTCTT
CAGGGGCTAT TGGTGGGGGC TATCGTGGGC TCTACTGATG CGGCAGCCGT ATTTTCATTG
CTTAAAGGCA AGCGTCTGAA CGAACGTGTG GGTGCGACAT TAGAGATAGA GTCCGGCAGT
AACGATCCCA TGGCTGTTTT TCTGACTGTG ACCTTAATAG CCATACTCGC TAGTGTAGGT
GAAGGAGTGT CGGCTAGCTT CATGGTGATG AGTTTCATCA AGCAGTTTGG CTTAGGGGCG
TGTCTGGGCT TAGGTGGAGG CTGGTTGTTA TGGCAATTAA TCAATCGAAT TCAGCTGGCC
GACGGCTTAT ATCCAGTCTT AGTGCTCAGT GGCGGCTTAA TCGTGTTTGC TATCTCAAAT
AGCCTGGGCG GTAGCGGCAT CTTGTCTATC TACCTGTTGG GATTACTATT GGGGAACCGT
GCGATGCAGG GCCGACATAC CATCTTGAGT GTGCTCGATG GCATGACCTG GCTGAGTCAG
ATTGGCATGT TCCTGGTCTT AGGCTTGCTC TTGACCCCAT CAGATCTGAC TGAGGTAGCG
ATTCCTGCAC TGGCGTTGGC ATTTGGTATG ATCTTGTTTG CCAGGCCCAT TTCCGTGTGG
CTGAGCCTGT TGCCATTTAA GAGTTTCAGT AGTCGGGACC GTTGGTTCAT CTCCTGGGTC
GGGCTGCGAG GTGCCGTACC GATTATTTTA GCGGTATTTC CTATGATGGC GGGTCTTCCC
AATGCCCAGC TTTATTTCAA TGTTGCCTTC TTTGTAGTCT TGGTCTCTCT GTTGGTTCAG
GGCTGCTCTT TAGGCAGGGC TGCGAGACTC GCTAAGGTAG AACTGCCAAC CAAACCTAGC
CCTATCTCCA GATCTGGCGT GGCCATCTAC CCTAAGAGTG ACTGGGAGCT TTTTGTTTAC
CACCTCAGCG AACATAAGTG GTGTGTGGGG GAGCCTATTC GCAGGCTCAA CATGCCTGCG
GGAACACACA TTGCCGCCCT GTACCGTGGC AAGGATATGT TGCACCCCTC GGGAAGCACT
AAGCTGCAAA CGGGAGATAT CTTGTGTGTA CTGGGGCATG AAAAAGATCT CGATGCCTTG
GGAACCCTGT TCAGTGAAGC GCCAATGCAG GAGGAGTTAC CGCGCTTCTT CGGTGACTTC
TTTCTCGATG TCGATATTCA ATTAGCCAGC CTGGCCCCGA TATACGGACT CGAACTCGAT
GATGAGGCGC AATATCTGTC TGTTGGAGAA TTGTTGGTTA AACATTTGGG GGATGAGTTG
GTGCTTGGGG ATCAGTTCGA ATGGCAATCG CTGAGTTGGG TTGTCTCTGA GCTGAGTCAG
GGAGAGGTTG TTAAGGTTGG TATACGGTTA CCCAATGATT CATAA
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| Protein sequence | MSAETINNFF LIGALLIAVS VLLSAVSSRV GIPILLVFLG VGIMAGEDGP GGIHFDDYSV
AYLVSNLALA VILLDGGMRT RVSSFRVALW PALSLATFGV AITTGLTGMM AAYLFDLNIL
QGLLVGAIVG STDAAAVFSL LKGKRLNERV GATLEIESGS NDPMAVFLTV TLIAILASVG
EGVSASFMVM SFIKQFGLGA CLGLGGGWLL WQLINRIQLA DGLYPVLVLS GGLIVFAISN
SLGGSGILSI YLLGLLLGNR AMQGRHTILS VLDGMTWLSQ IGMFLVLGLL LTPSDLTEVA
IPALALAFGM ILFARPISVW LSLLPFKSFS SRDRWFISWV GLRGAVPIIL AVFPMMAGLP
NAQLYFNVAF FVVLVSLLVQ GCSLGRAARL AKVELPTKPS PISRSGVAIY PKSDWELFVY
HLSEHKWCVG EPIRRLNMPA GTHIAALYRG KDMLHPSGST KLQTGDILCV LGHEKDLDAL
GTLFSEAPMQ EELPRFFGDF FLDVDIQLAS LAPIYGLELD DEAQYLSVGE LLVKHLGDEL
VLGDQFEWQS LSWVVSELSQ GEVVKVGIRL PNDS
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