| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3819 |
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| Symbol | |
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| ID | 5613399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4651399 |
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| End bp | 4651866 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640934773 |
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| Product | redoxin domain-containing protein |
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| Protein accession | YP_001475551 |
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| Protein GI | 157376951 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0554152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000365745 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAAC TATTGCTGTT GCTGAGCTTG ATGACGTGGA GCTTAAGTGC CGCGCCTTCG
CTGAACTATC AGGTACAAAA TTTTCAAGGC GAATTGGTGA GCCTGAGTGA ATTTAAGGGG
AAGGTGGTAT ACCTGGATTT TTGGGCCTCC TGGTGTGGAC CCTGTCGTAA GTCCTTTCCC
TGGATGAACG CAATGCATCA AAAATATCAA CAACAAGGCT TGGCTATTGT TGCCATTAAC
TTGGATGCAG ACAGGGCGTT AGCAGAAAAG TTTCTATCAA AATTACCCGC CGATTTTCAT
ATCCGTTTCG ACCCACAAGC CGATGTCGCC AGCCAGTTTG ATCTGCAAGG CATGCCGAGT
AGTTATCTTT TTAATCGCCA GGGAGAATTA GTACAAAAAC ACCTGGGCTT TTTTGAAGAA
AAATCGGCTG GTTATGAGAA TGAAATAGTC GAACTGCTGA AGGAGTAG
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| Protein sequence | MRKLLLLLSL MTWSLSAAPS LNYQVQNFQG ELVSLSEFKG KVVYLDFWAS WCGPCRKSFP
WMNAMHQKYQ QQGLAIVAIN LDADRALAEK FLSKLPADFH IRFDPQADVA SQFDLQGMPS
SYLFNRQGEL VQKHLGFFEE KSAGYENEIV ELLKE
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