| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3802 |
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| Symbol | |
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| ID | 5612040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4632760 |
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| End bp | 4633614 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640934756 |
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| Product | protein of unknown function RIO1 |
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| Protein accession | YP_001475534 |
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| Protein GI | 157376934 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
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| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.652997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC CGAAACGTAT TCAGCCTCTC GTAGATGAAG GCTTAGTTGA TGAAGTCCTT
CGTCCATTAA TGAGTGGCAA AGAGGCCGAT GTATTTGTTG TTCGTAGCGG CAATGAAGTT
CGATGCGCCA AAATTTATAA AGAAGCGGAG AAGCGCAGCT TTAAACAGGC TGTTCAATAC
CGTGAAGGTC GAAAAGGCCG AAATAGCCGA CGCGCTCGTG CAATGGAGAA GGGCTCGAAG
TTTGGTCGTA ACGAACAGGA GCAGGCCTGG CAGAATGCCG AGGTTGATGC CCTGTTTCGT
CTTGCTTATG CCGGCGTAAG AGTGCCTCAG CCATATGGTT GTTTCGATGG TGTGCTGTTA
ATGGAGCTCA TTACCGATGA GCAAGGGTTT GTTGCCCCCA GATTAAACGA TGTCACCCTG
ACAGCTGAGC AGGCTTTGGC GCACCATAAG GTGGTCATGA AAGATGTGCA GCGCATGCTC
TGTGCAGGTC TTATCCATGG CGATCTGTCC GAATTTAATG TCTTGTTAGA CAGCTGCGGC
CCGGTGATCA TCGATCTTCC TCAAGCCGTC GATGCGGCAG CGAATAATAA TGCCAAGCGA
ATGCTTGAGC GTGATGTAAA CAACATGACT CAATATTATG GTCAGTTTGC TCCTGAGTTA
CTGAAGACCA AATATGCGAA AGAGATGTGG GCACTGTTCG AGTCGGGTAA GTTGAATCCT
GACTCAGAGT TGACCGGGAA ATTTAAAGAG AGCACTAAGG CGGCTGATGT CGATTCCGTG
CTGGCTGAAA TCGAAGCGGC CTTCGATGAA GAGCAGGAAC GCAAAGAGCG GATCCGTGAG
GCGGTAGAAG GGTAG
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| Protein sequence | MKIPKRIQPL VDEGLVDEVL RPLMSGKEAD VFVVRSGNEV RCAKIYKEAE KRSFKQAVQY
REGRKGRNSR RARAMEKGSK FGRNEQEQAW QNAEVDALFR LAYAGVRVPQ PYGCFDGVLL
MELITDEQGF VAPRLNDVTL TAEQALAHHK VVMKDVQRML CAGLIHGDLS EFNVLLDSCG
PVIIDLPQAV DAAANNNAKR MLERDVNNMT QYYGQFAPEL LKTKYAKEMW ALFESGKLNP
DSELTGKFKE STKAADVDSV LAEIEAAFDE EQERKERIRE AVEG
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