| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3798 |
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| Symbol | |
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| ID | 5613907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4629600 |
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| End bp | 4631144 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640934752 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475530 |
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| Protein GI | 157376930 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0661143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTTTG GATTTAAAGA GATAGTAAAT ACATTTGGCT TATGTTTACT GATAAGTACA
CTACAACTGG CGCATTTAAC CCTCACTTCC ACGGAATACA GGGTGAGTCT GCGTCATGGT
GAAATGCGCC ACGATCTCAA CATATTAGTT GATGAGCTCA GGCAGCATTC GGCATTTTCT
GGCCTGAATA GCTCACGGTT GGAAAACATT GAGCAGGCAA TAGACTCTAT TCTCTATCGC
TACCCCATCA ATATTACCAG CGACAAATTC AAAGCCGAAG TGATAAAACT TATCGCCATG
CTCGATGACC CGGGCACAAG CATCACCACC CACACACAAG CTTCAGGCGT CCTACCGTTA
CGGTTGAGAC CCTTGGGAGA TACCTGGCTC GCACTGAACG AGGACGAGCA ACTGTTAGAT
CCGCAGCACC CCTACATTAC TCACATCGAT GGAATTCCAC TCTCTCGCTG GATAGATGTC
AGTTTACGTT TTATTCCGTA CTCCCTTAGA CTGAGTCTTT CTCAGCAGAT ACAATGGCTT
TCGCAACTTA ACATGCTGAG AGCGGAGATG GGACTCGCCG TTACCAATAA GGTCAGGCTC
ACTCTGACAG ATAACCTGGA TTCGAACATA CAGCTGATAT TAGCTGTGCA GACAGACTCT
CCGCTAAAAG ATGCACTCAT CCTCAAAGAC CCACTCGATA TTGAAAGCGG CGCCGCCCTG
ATTAGCATTA CAGATCTGAC CCGGTTTGAA ACCGACCCCT TGGCGCTAAA AGAGTTACAA
CTCGCCTTTA CGCACCCGTT AACCATCCTG GACTTAAGAG AGGTTACCGG AAACAGTGAC
AGGCTATTGA GGCTACTGGT CAGTGAGTTT GCAGGAACAG AGCAATTTAA CAGGAGTGAT
GAAGCCGATA GATACCTGAT GGCGTTATCG CAATATCGGC GCTCGACGGA CTTTAATGGC
AATCTGCTCA GGCCGCTTAA CTTTCTCCCT TTCGATGAAT TTAATTTCTT CGAGCAGCTT
CAATTTTCAG ATATCAGCCA AACGATAAAC AATGAAAATG CCGCCCGTTT TGGACACTGG
TATGCCAGAC GCTCTCCCGC AATCACAGGA TTAAACACAG ATGAAAGCAA GGCTCATCGT
CTCGCACTAT TAATCGGTCC CGAATGCCGG GAGGAGTGTG AGTGGATAGC CTACGTAGCG
AAATCTTTGC CCAGAGTGAC ACTTATTGGA GAGAAGACCT CCGGAGACTT AGGCAAACGC
TATGGTTTCA GGTTACCCCA GAGCAATATC GAGGTAAGAG TCACTGCAAG TATTACCTAC
AGCGCACGAG GGAAATTACT ATCGGGTATA GGTACCCAGC CGGACATAGA GCTACCAATC
AATGAAACCA TTCACTGGCA AGGTTTAGTC ACCTTGCTCA CTCATGAGAG AGGGCCCGGT
GAAAATAATC AAGCAAGCGT TCCTGAACTA TCGCTAAAAC GAGTTGAAAC TGCCGACTCG
AAAAACTCAG CACTCATCGA TTTATGGAGT CAAAGCTCCC CATAA
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| Protein sequence | MRFGFKEIVN TFGLCLLIST LQLAHLTLTS TEYRVSLRHG EMRHDLNILV DELRQHSAFS
GLNSSRLENI EQAIDSILYR YPINITSDKF KAEVIKLIAM LDDPGTSITT HTQASGVLPL
RLRPLGDTWL ALNEDEQLLD PQHPYITHID GIPLSRWIDV SLRFIPYSLR LSLSQQIQWL
SQLNMLRAEM GLAVTNKVRL TLTDNLDSNI QLILAVQTDS PLKDALILKD PLDIESGAAL
ISITDLTRFE TDPLALKELQ LAFTHPLTIL DLREVTGNSD RLLRLLVSEF AGTEQFNRSD
EADRYLMALS QYRRSTDFNG NLLRPLNFLP FDEFNFFEQL QFSDISQTIN NENAARFGHW
YARRSPAITG LNTDESKAHR LALLIGPECR EECEWIAYVA KSLPRVTLIG EKTSGDLGKR
YGFRLPQSNI EVRVTASITY SARGKLLSGI GTQPDIELPI NETIHWQGLV TLLTHERGPG
ENNQASVPEL SLKRVETADS KNSALIDLWS QSSP
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