| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3796 |
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| Symbol | |
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| ID | 5612077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4626961 |
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| End bp | 4627794 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640934750 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475528 |
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| Protein GI | 157376928 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00128596 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.967815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAT TAGCAAGGAT CAATGAGACA AAGGCTGCAC AGTCTGATGT GTCGGCCCGC
AAAAAAGCAC TGCTATTAGG TCGCCAGTTA GGGTTAAGCA GCGAAGAGGG CTATCGCCCC
GGCAATGCCT CTGTCGCCGA ACGGGCAGCC TTTCGTCAGC AAAAAGTATC CAGCCAGTAC
CAGGCTAATT TAGAAACGAT CTATGCGATA GCACTCAGCA ATACGCCTTC CGATGTAACC
GGAGTCGACC TCGATCCTGA CTGGGCACAC CAATTTTTTC AAATCGCCGA GCAGATCCAT
AACCGCAAGA TGCAGGAGTT ATGGGGACGA ATACTGGCCA ATGAGATAAC CACCCCAGGT
AACTTTAGTT TAAGGACCCT GTCGACCCTA AAGCAGTTAA CCCATAAAGA AGCTCAGATA
TTTGAAAAAG CCCTGGGTAT GGCGGTAAAG GTCAATAATG AATCACGCCT AAAGCTAATC
ATAGGCTATC GATACACAGG CGGTTTTGGG CAAATATTCA GAAAATCTTC ACCTATCAAT
ATTGGTCTTT CCAATTTTGG CCTGCCCTAC TCCAATATTC TGACCTTAGT CGATGCAGGC
ATTCTGCACA GAGGCGAGTT CGAGACCGGA CTACTAAACA GCAAAACCCC CATGAGCTTC
ACCTTGCTCG ATGAAAAAAT GAAATTAACC CCTAAGAGCG GTCATCTGCT ATTTAATTAT
TATCGGTTAA CGCCTATCGG TGACGAGTTA ACTCAACTCA TACACCCCAA AGCTGATACC
GAGTACGCAA AAGCCTTCAA GACACTATTT TCAAAAGATT TTAAGATTGA GTAA
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| Protein sequence | MVELARINET KAAQSDVSAR KKALLLGRQL GLSSEEGYRP GNASVAERAA FRQQKVSSQY
QANLETIYAI ALSNTPSDVT GVDLDPDWAH QFFQIAEQIH NRKMQELWGR ILANEITTPG
NFSLRTLSTL KQLTHKEAQI FEKALGMAVK VNNESRLKLI IGYRYTGGFG QIFRKSSPIN
IGLSNFGLPY SNILTLVDAG ILHRGEFETG LLNSKTPMSF TLLDEKMKLT PKSGHLLFNY
YRLTPIGDEL TQLIHPKADT EYAKAFKTLF SKDFKIE
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