| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3795 |
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| Symbol | |
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| ID | 5612076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4625710 |
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| End bp | 4626900 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640934749 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001475527 |
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| Protein GI | 157376927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000234716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA GCCCGCAAAA ACTCCTTCTC TGGATGACTT TTATCATGTC TCTGGTGTTT
TCGGTATGGC AGGTGCTTTT AAATAATTTC GTTATCGAAC AGGCACAATT CACAGGTGCC
GAAATTGGTG TGCTCCAGAG TTTACGAGAG GTTCCTGGCT TTCTCGCCTT CACCGCCATC
TTCATTCTTC TGCTTATCCG CGAACAAGCA TTTGCACTAC TCTCGCTCGC CCTATTGTGT
GTCGGCGTCG CGATCACAGG CTTTTTCCCC CAAGTCTTAG GGCTTTATCT GACTACCATA
TTGATGTCAG TCGGATTTCA TTACTTCGAA ACCATCAACC AGTCCCTGAC GCTACAATGG
GTGGATAAGA AAGAGACAGC CGGTTTTCTG GGTAAGGCAC TGGCATGGCG CTCTGCGGCG
GCGCTGTCAG GCTATGCCAG CATCTGGCTA ATCATGAGTT GGCTTAAACT CGATTATGTG
TGGATGTACG CGCTGATAGG CTGCTTGGGC CTCTTGATGG TGATCACTAT TACCGTGTAT
TTCCCCCAAT TTGAGGTCGG AGAGCCCCAA CATAAGAAGG TGATCCTCAG AAAAAAATAT
TGGCTCTATT ACCTGCTGAC TTTTTTCTCC GGGGCAAGAC GCCAAATATT CATGGTGTTC
GCCGGCTTTA TGATGGTGGA AAAGTTTGGC TATAGTGTGA GTGAAATTAC CACATTATTT
CTCATCAACT ACGTTATTAA CCTGCTGTTT GCTCCGGCTA TCGGTCGCTT CATCGGTCGA
ATTGGCGAGC GAAGAGCACT GACAATTGAG TACCTTGGAC TGATCATCAT CTTTGTCAGC
TATGCACTGG TTGAACACCC TGAAATGGCG GCCGCACTCT ATGTTATCGA CCATCTGTTA
TTTGCGATGG CCATAGCGAT CAAAACCTAT TTCCAAAAAA TTGCCGACAG CAAAGATATT
GCCGCGACCA TGTCAGTTAG CTTTACGATT AACCACATCG CCGCAGTCGT GATCCCGGCC
ATGCTGGGCC TGCTTTGGCT ATACTCACCT CAAGCGGTAT TCTACATAGG GGCGGGGTTC
GCAGCCTGCT CGCTGCTTCT GGCCAGGAAT ATTCCAACGA TGCCTACTCA GGGAAATGAA
GTGAATTGGT CATGGAGTCC AAAAAAAACA GCACACAGAG TGAAGCAATG A
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| Protein sequence | MSKSPQKLLL WMTFIMSLVF SVWQVLLNNF VIEQAQFTGA EIGVLQSLRE VPGFLAFTAI
FILLLIREQA FALLSLALLC VGVAITGFFP QVLGLYLTTI LMSVGFHYFE TINQSLTLQW
VDKKETAGFL GKALAWRSAA ALSGYASIWL IMSWLKLDYV WMYALIGCLG LLMVITITVY
FPQFEVGEPQ HKKVILRKKY WLYYLLTFFS GARRQIFMVF AGFMMVEKFG YSVSEITTLF
LINYVINLLF APAIGRFIGR IGERRALTIE YLGLIIIFVS YALVEHPEMA AALYVIDHLL
FAMAIAIKTY FQKIADSKDI AATMSVSFTI NHIAAVVIPA MLGLLWLYSP QAVFYIGAGF
AACSLLLARN IPTMPTQGNE VNWSWSPKKT AHRVKQ
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