| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3790 |
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| Symbol | |
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| ID | 5612218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4618986 |
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| End bp | 4619513 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934744 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001475522 |
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| Protein GI | 157376922 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGTGA GCAACATCTT AATTATCTAC TCAAGTGTGC ATGGTCAGAC GCGTAAGATC
TGTGAATATT TAGAGCAACA ACTTGAGGCT GTTGGAAATA CTGTGACTGC ATCGAGTATC
GATGACGTAC CCGATTTGGC GGTATTCGAC AAGGTAATCT TAGGTGCAAG CATCCGTAAC
GGTAAGCACA ACCCATCCGT TTATGAGTTT ATATCTCACA ATCGTGTTAT GTTGGAACAG
AAGGTCACCA GCTTCTTCTC GGTTAATCTG GTGGCGCGCA AGCCGGCGAA AAATACCGTA
GAGACCAACC CATATACCAA GGCGTTTCTC GAGAAAACAG ATTGGCGTCC TACTTTGCTG
AAAGTTGTTG CAGGTAATAT AGATTATCAA GGTTACGGTG CAATGGATCG TAATATTATT
CGTTTCATCA TGTGGATCAC CAAAGGTCCT ACCGATGCCA ACACTAAGAT TGAGTATACC
GACTGGGCTA AGGTTGAGAC ATACGCTCAA GAGTTTCACG CACTTTAA
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| Protein sequence | MLVSNILIIY SSVHGQTRKI CEYLEQQLEA VGNTVTASSI DDVPDLAVFD KVILGASIRN
GKHNPSVYEF ISHNRVMLEQ KVTSFFSVNL VARKPAKNTV ETNPYTKAFL EKTDWRPTLL
KVVAGNIDYQ GYGAMDRNII RFIMWITKGP TDANTKIEYT DWAKVETYAQ EFHAL
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