| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3773 |
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| Symbol | |
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| ID | 5610123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4597638 |
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| End bp | 4598702 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934727 |
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| Product | beta-lactamase-like protein |
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| Protein accession | YP_001475505 |
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| Protein GI | 157376905 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.957871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGA TATTTCACCG AATCCGCACT GAACGTGGCT GTCAGTCTTA CTTAATCGGC
TGTAGTGAAA CTAACTCCGC AATCATCATA GACCCTGAGA TCAGTCAGAT GGAACACTAT
TTGGGATTGG CCAGCCATGA TGGACTAGCT ATCCATTACC TGCTCGACAC CCACACCCAT
GCAGACCATT TCTCGGCGAG TAAGCAGCTT GCAAGTCAAT TGAAGGTCCC GGTCATTATG
CATTGCAACA GCCCGGCCCC CTTCGTCGAT ATGTACGTCG ATGACGGTGA GATCATCATA
GTCGGTAAAC TCAGGCTTAC CATAATGCAC ACCCCTGGCC ATACTGCAGA CTCTATATGT
ATAGTAATGA AAGATAGGGT ATTTACCGGA GATACTCTGC TCTTAGGTGG AACCGGGCGA
ACCGACCTAC CCAGCGGTGA CCCCGAGCGG CTATACGATA GTCTCTTTAA TGGCTTGCTT
AAGCTCTCTG CCGATCTGAA AGTCTATCCG GCCCATGCCT ACTCGGAGCG AACCCATAGC
AGCATAGGGG AGGAACTTTC AAATAATCCC AGGCTGCAAA AGAAAGACAG AGATGAGTTT
GTCGCCCAGA TGCGGGCAAT AGATCTCAAG ATGCCAACCC AGCTGACCGA GTCGTTACGC
ACAAATTTAA GCGGCGGGAA AACCGTCGAA CAGTTTATCA GTGATGCCGA GAGAAAGATC
TCATTTGTCT CACTTGAACA GGTGCTGCGT TATAGCCAGT CGATAGCGCC GAAGTTTGTC
ATAGTCGATG TACGCGAGCG AGATGCCTTC GACAAGGGGC ATATTGCCGG GGCCATTCAT
ATCCCCAGAG GGCAGCTGGA ATTGCGGGTC AACGAATTGC TGCCCGATCC AACCCGGCGT
ATCGCCGTCT ATTGTGAGTT CGGCATCATT TCGGTGTTAG CCACCTCGAC CCTGAGAGAG
ATGGGCTTCT TACGAGCCGT TGCCCTGGAT CATGGCTTAA ACCTTTGGCG GGAGCTGGGC
TACCCGTTAA TTGAGAGTAA GAATGAGGAG GGAAACGAGC AATAG
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| Protein sequence | MSMIFHRIRT ERGCQSYLIG CSETNSAIII DPEISQMEHY LGLASHDGLA IHYLLDTHTH
ADHFSASKQL ASQLKVPVIM HCNSPAPFVD MYVDDGEIII VGKLRLTIMH TPGHTADSIC
IVMKDRVFTG DTLLLGGTGR TDLPSGDPER LYDSLFNGLL KLSADLKVYP AHAYSERTHS
SIGEELSNNP RLQKKDRDEF VAQMRAIDLK MPTQLTESLR TNLSGGKTVE QFISDAERKI
SFVSLEQVLR YSQSIAPKFV IVDVRERDAF DKGHIAGAIH IPRGQLELRV NELLPDPTRR
IAVYCEFGII SVLATSTLRE MGFLRAVALD HGLNLWRELG YPLIESKNEE GNEQ
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