| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3771 |
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| Symbol | |
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| ID | 5610121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4594648 |
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| End bp | 4595529 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640934725 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001475503 |
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| Protein GI | 157376903 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCA TCAATCAATT TTCCGCCAGA CCCGCGATGG ATGGCGATGG GGTGAATATT
CGCCGGGTGG CGGATTTTAA CAATACCAGG TTCGACCCAT TCCTGATGCT GGATGAGATA
AAATCTGATG ATAAGCAAGA TTTTATCGGT GGCTTCCCGC CACACCCTCA TCGCGGTATT
GAAACCTTTA CCTATATAAA AAAGGGTGGC TTTGAGCACA GAGATCAGTT GGGTAATGTT
AAAGCGATTC GGGCCAAAGA TGTACAGTGG ATGAGCACCG GAAGCGGGGT TATCCATTCT
GAAATGCCTT TAGCCGATGC CGATGAGGGG CTGCACGGTT TTCAAATCTG GGTGAATATG
CCCGCAAATC AGAAGATGCG TCCGGCAAGG TATGAGGACA GCAGTGAAAC CGCGAACCCA
GAGTCGACTA ATGACAAAGG TGCGCTATTG CGGGCGCTGG CCGGTAACTG GGCCTTTACA
GGGCAAAGCA GCATCAGCGC GCCGATACAG GATCTGGCAG GTGAGGCCGC GATTGCGGAT
CTGATGCTAA GCCCCGAAGC AATGGCTGAA CTGCAGCTGG ACAGGCATGA GTTTGTCGGC
CTCTATCTCT ACGAGGGAAC GCTTATCGGC AACAATGATG CCCAGAGCTC CGATAACACC
CTCCCTAATG ATTATTCTGC AGGTACATAT TTGATTCTGG ATAGTCAGGA TCTACTCAAA
CTTCAGGCCG GACCGGATGG CGCGGGGCTG TTACTCTTTG CCGGACAACC AATCAAAGAG
AAGATTGTCC ATATGGGGCC CTTTGTGATG AATACTCAGG CCGAGATAGA GCAGACTATC
AAGGACTACC AAGAGGGTCG TTTCGGCGAG ATCCCGCTTT AA
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| Protein sequence | MRVINQFSAR PAMDGDGVNI RRVADFNNTR FDPFLMLDEI KSDDKQDFIG GFPPHPHRGI
ETFTYIKKGG FEHRDQLGNV KAIRAKDVQW MSTGSGVIHS EMPLADADEG LHGFQIWVNM
PANQKMRPAR YEDSSETANP ESTNDKGALL RALAGNWAFT GQSSISAPIQ DLAGEAAIAD
LMLSPEAMAE LQLDRHEFVG LYLYEGTLIG NNDAQSSDNT LPNDYSAGTY LILDSQDLLK
LQAGPDGAGL LLFAGQPIKE KIVHMGPFVM NTQAEIEQTI KDYQEGRFGE IPL
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