| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3769 |
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| Symbol | |
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| ID | 5610227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4591769 |
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| End bp | 4593175 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640934723 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475501 |
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| Protein GI | 157376901 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAG AGAAGGATAA CAATTCCACC GATGCGCCGG CGGATCCGTC CCGGCGTAAG
ATGTTCAGAC TCAGTGCGGT GGCGGCAGGC ATCGCCGCAG TGGGCGGTGC AGGCACTTTC
ATCAGCCATC GCGTTGAGGG CGTTCCCTTT GAGGGCGGTT TCCCTATGCC AATTGATGAT
AAGGTGCTCA AGCCATTTAA TCAGCGTAAC TGGATCTTTT CACAAGGCGG CTCCGAGAGG
AACCGGGCCG AATTTCCTAA TCGGGATAAG GCATTTTCCG AGTTGATCGG CGAAGAGGAC
TGGTCCTTTC AGGATGGTAT GTTTGCCGCG TCAGACTATA CCCGCAGCCC GGAGCAGTGG
GATAACGCAC GTCCCGGTTA CCAGCAGATA GACTGGGCAC TCTTCTGTGC GGCCTCACAC
CCGCTGGAAT ACCTGGGTAA GATGGCTAAA TTCGGCATGC CGGATGCGCC GGGGATCTGT
GGCTGGCCCC AGAAGAACCT TGCGCCGGTG AAGTGGCAGT TTGCATCCAA AAAAGAGGCG
GCCACCAAAA TCAAACGCGC CGCTAAGCTG TTTGGCGCGA CCCGGGTTGG GATCACTTAT
AACGATCCAC GCTGGAACTA TGAACCCATG TACAACATCT TCGAGTCTAA GGAGGTCTCT
TGGGATGAGT ACCCCTTCAA GCCCAAGACT GTCATCGTCA TGCTGCACGA GATGGATTAC
GACGCGATAA GAACCTCCCC GTCTCCCGCC TCCGTGGGGG CCGTCAATAA GGGCTACACC
GACATGGCGG TAAAGGCGGG CTCACTGGCC GACTTTATTC GACGCCTGGG CTATAAGGCG
ATAGCTTCGC ACAATGATTC TATCAACAAA GTGGCTTACG GTATCATGGC CGGGCTTGGC
GAAGGCGCAC GAAATGGTGC CTTGGTGGCC CCGGGATTAG GGCCGCGAGT CCGTATCTCG
GCGGTGATCA CCGATTTCGA TTTTGTCGAA TATGACAAGC CACGCAACTT CGGCATCATG
GAGTTCTGCG AACATTGTAA ATTGTGTGCC GATCGTTGCC CCTCCAAGGC CATCACATTC
GATGACAAGC CTGGCTTCAA ACCCACCTAC GAGGGTGCTG ACAACCCGGA TCTGGCTTGG
GCCGGGCAGA TCGGGGTCAA GAAGTTCTAC AACGATGCCA AGAAGTGTTT CAAGTTCTGG
GCTGATAATA CCGTCGCCTG TACCAATTGC ATCAAGGCAT GCCCGTGGAA CAAGCCGGAT
TTCTGGCACC ACCGCCTGAT CGATGCCTCC AACACCTTCA CCAAAGGTCC GGTCCACACC
TTTATGAAGG ATATGGACAC CCTGTTCGGT TACGGCGATA TGGATGTGGC TAAGGCTACC
AAACTGTTTT GGAATAAGGA GGATTAG
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| Protein sequence | MTTEKDNNST DAPADPSRRK MFRLSAVAAG IAAVGGAGTF ISHRVEGVPF EGGFPMPIDD
KVLKPFNQRN WIFSQGGSER NRAEFPNRDK AFSELIGEED WSFQDGMFAA SDYTRSPEQW
DNARPGYQQI DWALFCAASH PLEYLGKMAK FGMPDAPGIC GWPQKNLAPV KWQFASKKEA
ATKIKRAAKL FGATRVGITY NDPRWNYEPM YNIFESKEVS WDEYPFKPKT VIVMLHEMDY
DAIRTSPSPA SVGAVNKGYT DMAVKAGSLA DFIRRLGYKA IASHNDSINK VAYGIMAGLG
EGARNGALVA PGLGPRVRIS AVITDFDFVE YDKPRNFGIM EFCEHCKLCA DRCPSKAITF
DDKPGFKPTY EGADNPDLAW AGQIGVKKFY NDAKKCFKFW ADNTVACTNC IKACPWNKPD
FWHHRLIDAS NTFTKGPVHT FMKDMDTLFG YGDMDVAKAT KLFWNKED
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