| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3767 |
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| Symbol | |
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| ID | 5610225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4588364 |
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| End bp | 4591273 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640934721 |
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| Product | sulfite reductase alpha subunit (flavoprotein)-like protein |
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| Protein accession | YP_001475499 |
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| Protein GI | 157376899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
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| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC AACCAGCATC TTCTATGAAA AAGAACTTAG GCCCCCATCT CGAGAAACTG
TGGCTCTTGT TTGCATGGAG CACATTGATT CTAGCCTTCA TCATAGGGCA TATCGCGGCG
AAGCCCGACT ACCTGACGAT GGCTAAGAGC CATTTCTCAA ATTTTAATCT GGTTCCTTCC
AAAGACTATA CCAGTCTGCC TGTGGTCTTT GTGCCCGGAG AGGATAGCCA AAGCAGCATC
TCGGGTGGCG AGGCCGTGGT CATCGCCGCC GGTACCGGCT ATGGCGGGCC ATTCGTGCTG
GGGGTGAGAG CCCAGAAAGG TGAGAACTCC GCCCGAATTA AAGAGGTGGT GGTCTTGTCG
CATAAAGAGA CCCCCGCATA CCTGCAAAAG CTGATTAATA ACAATTTTTT CAGGCAGTTT
ATCAATAAAT CGGTCACCGA TAATTTTCTG TTAGAGGAAG ATGTCGACGG TATTTCCGGC
GCAACAGTGT CGTCTAAGGG CTTTACCAAG GCGATAGGTT TGGCCTTGCA CCAAGGGGCT
CAAAGTCATC TTGGATACGA GAAAACCTGG CATGAAGTTG AGTGGTCGCC GGGGCTCAAT
GAAGCCCTGA TGGTCGCCCT GTTTTTGATG GTGCTGGTGG TCGTCTATGC GCCGAGACAG
ATAGCTAAAC CGTTTAAGTT GATCTTACCT TTTGCCAGCC TGGCCTTCGT TGGGTTTTAT
GTGAATGCCT CGATTAGTCT GGGTACTCTG GCTGGTATCG CCATGGGCTA TGTTCCCGAA
TTCAGGCAAT ATCCCATCTG GTGGATCATT GTCGGTGGTG TGCTGGGCGG TATCCTCCTC
TTGGGGCGCA ACCTCTATTG TGGTTACCTC TGTCCTTTCA GCGTGATCCA GGATCTACTG
CAAAAAGTAA GCGGTATCAA GCTGGCTCTG CGACCGGGCA TGGCCAGAAA CGCCAGACGC
GTCATCTATG GCCTGAGCTG GTTGGCGCTT ATCTTGATCT TCCTGTCACG CCACCCGGCC
TTAGGTTCCT ACGAACCCTT CGGCATGATG TTTTCACTTC AGGGGATGGG CATTCAATGG
TACATCTTAC CCTTTAGCCT GCTGGGTTCC TTCTTTGTGC CTCAGTTCTG GTGCCGCCTG
TTCTGCCCGG TGGGTCTGTA TCTATCCGAG GCGGTGCGTC TGCAGCATGC CACGGTTCGC
ACCGTAGGCA ATATCTTAGT GAAAAATGTT ACCGGACGGC CGAGTGATTC GAAAATTATT
GCCGATAGTT ACTCCAAGGC GACCGACACG CTTACCATCT TGTTTGCATC TCAAACCGGT
AACTCGAAGC ATCTGGCTTA TCAGTTAAAA GCGAGTTGCG ATGCCAATAG CTTGCCGGTG
CGCATCGCGT CCATGGCCGA CTACGATACC GATAACCTGC AGCGCGAAAG TCACCTGATT
ATCGTGACCA GTACCTATGG TGAGGGTGAG CCACCCGAGA GTGCCGAGGG TTTCTATCAC
ACCCTCTTTG CGGACAATGC CCCACAGTTA CCCGATCTCT CCTATTCGAT ACTGGCTCTG
GGTGACACCA GTTATCGCTT CTTCTGTAAG ACAGGCATAG ACTTCGATGA GCGTCTTAGC
GAGCTTGGAG CACAGCGCCT CCATGAGCGG GCTGAGTGTG ATGTCGACTA TGATGCCATG
GCGGACACAT GGATAACTTC TGTCATTAAG GTGCTGCAAA ATCGACTGGA AGCCAGCTGT
GCCAATGCCG TTATGCCCAT CGAATCGACG GGAGCGGAGC AGGCTTACTA CAACAAGGCG
CGTCCATTTT CGGCCCGTCT GTTATGCAAT GACAGACTCG CACCCGATGC CTGTGAAAAA
GATTTTCGTC ATATCGCGCT GTCACTGGAG GGCTCGGGGA TCCAATATCA GCCAGGCGAT
CTGCTGAGCG TCTGGTTTAA AAACGACGAG ACAGAGGTCG CAACGCTGCT GGCCAACTTG
TCTATCCCGG CCGACGTCGA GGTTGAAGTT GATGGCAACA TCAGAACAAT TTCACAGGCC
TTGATTGAAA ATTATGAGCT GACCCAGTGT CACCCTGCCT TTATCGAAAA GTATGCGACG
CTGAGTCAAC AAGCCGAGCT ACTTGGTTTA GTGGCTGACT TCGATGGGGT GCGTGACTAT
GCACGTCGCC ATCAGATCTT CGAGTTGGTA CGTCTCTATC CGGCCCGACT TACGGCGGAG
CAGTTGCTGT CATCTCTGCG CAGATTGACG CCGAGAAAAT ACTCTATCTC CTCCAGTCAG
TCGGACGTTG GTGAAGAGGT TCACTTAACG ATAGCCGTGG TCGAGTATAT GTCGGGTCAA
GGTGTCGAAA GTCATCGATA TGTGGGCGGA GCCAGCGGCT ACCTGTGTCA GCGACTGGCA
CTGAATGCCG AGGTGAATAT CTTCGTCGAG GAGAATGAAC ACTTCCGTCT GCCAGAACAC
GGCGATGCGT CCATGATCAT GATTGGTCCC GGCACCGGCG TTGCGCCGTT CAGGGCATTC
ATGCAGCAGC GCGCCGCGCA AAAGCATACA GGTAAGAGCT GGTTATTCTT CGGTAACCGT
AATGAAGAGC TCGATTACCT CTACCGGGAT GAGTGGCAAC AACATCTGGA CTCAGGCGTA
TTGACCCGTA TGGATCTTGC CTTCTCACGG GATCAGCAAC AGAAAATCTA TGTTCAGCAT
CGTATCGAAC AGCAGGGCGC GGAGTTTTAT GGCTGGCTCG AGCAGGGCGC GTATATCTAT
ATCTGTGGCG ATGTCTCACA CATGGCTGTC GATGTAGAGA AGGCGATTTT GCAGGTCATC
GAACTCCATG GGGAGATGTC CTGTGATGAG GCATTGAAAT ACTATGAACG CCTGAAACAT
GAAAAACGCC TGTTGAAAGA CGTCTACTAA
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| Protein sequence | MNKQPASSMK KNLGPHLEKL WLLFAWSTLI LAFIIGHIAA KPDYLTMAKS HFSNFNLVPS
KDYTSLPVVF VPGEDSQSSI SGGEAVVIAA GTGYGGPFVL GVRAQKGENS ARIKEVVVLS
HKETPAYLQK LINNNFFRQF INKSVTDNFL LEEDVDGISG ATVSSKGFTK AIGLALHQGA
QSHLGYEKTW HEVEWSPGLN EALMVALFLM VLVVVYAPRQ IAKPFKLILP FASLAFVGFY
VNASISLGTL AGIAMGYVPE FRQYPIWWII VGGVLGGILL LGRNLYCGYL CPFSVIQDLL
QKVSGIKLAL RPGMARNARR VIYGLSWLAL ILIFLSRHPA LGSYEPFGMM FSLQGMGIQW
YILPFSLLGS FFVPQFWCRL FCPVGLYLSE AVRLQHATVR TVGNILVKNV TGRPSDSKII
ADSYSKATDT LTILFASQTG NSKHLAYQLK ASCDANSLPV RIASMADYDT DNLQRESHLI
IVTSTYGEGE PPESAEGFYH TLFADNAPQL PDLSYSILAL GDTSYRFFCK TGIDFDERLS
ELGAQRLHER AECDVDYDAM ADTWITSVIK VLQNRLEASC ANAVMPIEST GAEQAYYNKA
RPFSARLLCN DRLAPDACEK DFRHIALSLE GSGIQYQPGD LLSVWFKNDE TEVATLLANL
SIPADVEVEV DGNIRTISQA LIENYELTQC HPAFIEKYAT LSQQAELLGL VADFDGVRDY
ARRHQIFELV RLYPARLTAE QLLSSLRRLT PRKYSISSSQ SDVGEEVHLT IAVVEYMSGQ
GVESHRYVGG ASGYLCQRLA LNAEVNIFVE ENEHFRLPEH GDASMIMIGP GTGVAPFRAF
MQQRAAQKHT GKSWLFFGNR NEELDYLYRD EWQQHLDSGV LTRMDLAFSR DQQQKIYVQH
RIEQQGAEFY GWLEQGAYIY ICGDVSHMAV DVEKAILQVI ELHGEMSCDE ALKYYERLKH
EKRLLKDVY
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