| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3757 |
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| Symbol | |
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| ID | 5609826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4577823 |
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| End bp | 4578500 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934711 |
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| Product | 2OG-Fe(II) oxygenase family oxidoreductase |
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| Protein accession | YP_001475489 |
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| Protein GI | 157376889 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3751] Predicted proline hydroxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATTTCAC ATCGAACCTC TCAAACAGAT GATAGCCCAT CTCTTTTTGA ATCTATCGCC
AATGATATCG CCACTAAAGG CTTTAGTATT AACCCTGCGG CACTTCCTCT GGATTTAACT
CATTTATTAG CACAACACAT CACCACCATG CCCGACACTC ACTTTAAACG TGCAGGCATT
GGCCGAACGA CTGAGCATAG GGTGAATGAC TTTGTGCGTA CCGATGCGAT CTGTTGGATT
AATGGTGACA GCGATGCGGA GATTGGGTGG CTTAACTGGG CCCGGTCGTT GCAAGCATTC
TTGAATAGAA GGCTATTATT AGGGTTATTC TCGTTTGAAA GTCACTTTGC TCACTATGCA
AAAGGCGACT TTTATAAGAA ACACAAAGAT GCATTTACAG GTGAAGGCAA TCGAGTGCTG
ACAGTGATTG TTTACCTTAA TGAGCATTGG TCTACAGAAG ATGGTGGCGA GCTGGTGATT
TATCCAAATC AACAATCGAT CTCAGCTGTA ATTGATGATC ACACTGTTAG CGTGACACCA
GGCTTTGGTA CGCTAGTGGT ATTTTTAAGT GAAGAGTTTC CTCACGAAGT ACTGGCTGCA
CAGCGAGACC GTTATTCCAT TGCTGGCTGG TTTAGACTCA ATTGCAGTAT CGACAATAAT
ATTGATCCGC CGCGATAA
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| Protein sequence | MISHRTSQTD DSPSLFESIA NDIATKGFSI NPAALPLDLT HLLAQHITTM PDTHFKRAGI
GRTTEHRVND FVRTDAICWI NGDSDAEIGW LNWARSLQAF LNRRLLLGLF SFESHFAHYA
KGDFYKKHKD AFTGEGNRVL TVIVYLNEHW STEDGGELVI YPNQQSISAV IDDHTVSVTP
GFGTLVVFLS EEFPHEVLAA QRDRYSIAGW FRLNCSIDNN IDPPR
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