Gene Ssed_3751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_3751 
Symbol 
ID5610169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4570685 
End bp4571113 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content37% 
IMG OID640934705 
Productnuclease 
Protein accessionYP_001475483 
Protein GI157376883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA GACAAATTCA TGTTTTTATC AGTCATGCAT GGTCTCATTC TGGTCATTAT 
GACACTTTGT CTGAATGGAT TTTCAATGAA AACTGGAGTG TAGGTCAAGC TTCGTTAGAC
TTCAGAGATT TTTCGGTTCC AAAAGATAAT CCTATTCATG ATGCAGATGA TGATGACCAG
CTACAAGCTG CACTATTTAA TCAAATTGCT CGCAGTCATA TCATAGTTAT ACCTATGGGA
ATGTATGCAA ATTATAGCAA GTGGATTAAA AAGGAAATTG ATGGTGCTGG TTTATATAGT
AAACCAATTT TAGCTGTAAA CCCTTGGGGG CAGGAGAGGA GTTCAAGTGT CGTTGGTGAT
GCAGCAGATA AGAAAGTTGG CTGGAATAAA AAAACAGTGA TCAATGGGAT TTGGGAACTG
TATAAATAA
 
Protein sequence
MSTRQIHVFI SHAWSHSGHY DTLSEWIFNE NWSVGQASLD FRDFSVPKDN PIHDADDDDQ 
LQAALFNQIA RSHIIVIPMG MYANYSKWIK KEIDGAGLYS KPILAVNPWG QERSSSVVGD
AADKKVGWNK KTVINGIWEL YK