Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_3751 |
Symbol | |
ID | 5610169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 4570685 |
End bp | 4571113 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640934705 |
Product | nuclease |
Protein accession | YP_001475483 |
Protein GI | 157376883 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAA GACAAATTCA TGTTTTTATC AGTCATGCAT GGTCTCATTC TGGTCATTAT GACACTTTGT CTGAATGGAT TTTCAATGAA AACTGGAGTG TAGGTCAAGC TTCGTTAGAC TTCAGAGATT TTTCGGTTCC AAAAGATAAT CCTATTCATG ATGCAGATGA TGATGACCAG CTACAAGCTG CACTATTTAA TCAAATTGCT CGCAGTCATA TCATAGTTAT ACCTATGGGA ATGTATGCAA ATTATAGCAA GTGGATTAAA AAGGAAATTG ATGGTGCTGG TTTATATAGT AAACCAATTT TAGCTGTAAA CCCTTGGGGG CAGGAGAGGA GTTCAAGTGT CGTTGGTGAT GCAGCAGATA AGAAAGTTGG CTGGAATAAA AAAACAGTGA TCAATGGGAT TTGGGAACTG TATAAATAA
|
Protein sequence | MSTRQIHVFI SHAWSHSGHY DTLSEWIFNE NWSVGQASLD FRDFSVPKDN PIHDADDDDQ LQAALFNQIA RSHIIVIPMG MYANYSKWIK KEIDGAGLYS KPILAVNPWG QERSSSVVGD AADKKVGWNK KTVINGIWEL YK
|
| |