| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3750 |
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| Symbol | |
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| ID | 5612235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4569523 |
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| End bp | 4570470 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640934704 |
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| Product | serine protease |
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| Protein accession | YP_001475482 |
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| Protein GI | 157376882 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATG TTGTATTTAT TCATGGAATT GCAAATAAAC CAGAAAAAAA GATATTGCAT
CAGCTGTGGT TAAATGCTTT AGCACTAAAT GATGGTATCC ATTTGGGAGC TGAAGGCATT
GAATCTACGA TGGTTTATTG GGCCGATGTC CTCTATGAGT CTCCAAAGAA AGAAATGGCT
GAGCATGAAA ATAATGACAG CGTTGTAGAA CCTGAAGACT ATATTGATAT GTCTTGGCTG
AATGAGCTTA AAGGTCAAGA ATTAGATTGG GCTATCAAGT TACAGAAACA GTTAGGTTAT
AGCGTTGAGT CGCCGGATGG TACGGATGAT TATTGCCCTT CGGGTGAAGT TATTGATGAG
CTAGAAACAC TAGACTTTGA ACGAATTCCA CTTCCTTGGT GGCTAAAACG CAGATTAATG
AAAATCCTTT TAAAAGACGT CCATCATTAT CTTTTTAATG TTGAGTATTC CCCTCGTACT
GATGATACTT TTAGTGTTCA GGATGAGATT CGAAACCGAT TTATTAAAGC TTTGGAGCAA
GCTCGCAAAA AAGAAGGACC GTTGATTGTT GTAAGTCACA GTATGGGAAC TGTTATTGCC
TATGATTGCC TCACTCGAGA TCCTCGGTGC CCAAAAATTG ACTCGCTGAT TACAATAGGT
AGCCCTTTGG GTCTAGATGA AATTCAAGAC AAGCTTCAAC CTGAATGGAC TCGGGAAAAT
GGTTTTCCTG GAACTATAAT GGAAAATTGG TTTAACATTT ACGACCGTTT AGATCCGGTA
GCCAGTTTAG ATCCCAACCT TTCTAACGAT TATCAAAAAC AAGGGGCTGA GGTTATTAAG
GACATCAATG AGCAGAACTC TGGGGTTTGG CGACACAATA TTTCCAAATA TCTGATGGGG
GCAGAATTTA GGGCTATATT GTCCAGCGAG CTCAAATTGG AAGAATGA
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| Protein sequence | MANVVFIHGI ANKPEKKILH QLWLNALALN DGIHLGAEGI ESTMVYWADV LYESPKKEMA
EHENNDSVVE PEDYIDMSWL NELKGQELDW AIKLQKQLGY SVESPDGTDD YCPSGEVIDE
LETLDFERIP LPWWLKRRLM KILLKDVHHY LFNVEYSPRT DDTFSVQDEI RNRFIKALEQ
ARKKEGPLIV VSHSMGTVIA YDCLTRDPRC PKIDSLITIG SPLGLDEIQD KLQPEWTREN
GFPGTIMENW FNIYDRLDPV ASLDPNLSND YQKQGAEVIK DINEQNSGVW RHNISKYLMG
AEFRAILSSE LKLEE
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