| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3746 |
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| Symbol | |
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| ID | 5609743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 4561350 |
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| End bp | 4563953 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640934700 |
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| Product | (protein-PII) uridylyltransferase |
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| Protein accession | YP_001475478 |
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| Protein GI | 157376878 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC CTGATATATC ACCTCAATTC AATGCAGAAA TGGGCATTAC TGATTATAAA
AAAGTAATCC AAGATGCTGA CAACTACTTT AATGAAAACT TTACCCACAT TGCTATCGAC
GAGATAGTAA AGTTACGCGC TGATTTCTTT GATACTTTAC TTCTCCATCT CTGGAAATGT
GCCGATCTCG CTGACGAAGA TATATCTCTC AATGCCGTAG GCGGTTATGG CCGTCAAACG
CTACACCTGC ACTCCGACAT TGATATGTGT GTCTTATCTT CCCAAGAGCT TAGCCCTCAT
CAAGCCACCC AGATTGGCCA GTTTTTCACC CAACTATGGG ATATTGGGCT GGAGCTCGGC
CATAGCGTGC TAGCACTGAA TGAAATTGAT AATGCGTGTG AAGATATAAC CATTGCGACC
TCACTGTTTG AGATCCGCCA TTTATCGGGA CCAGAGTCTC ATGCGAATCA GGTCTTAGAC
AGACTCTATG GTGATGACCT CTGGAGCAGT GAAGCCTTCT ATAAAGCGAA ATTCAGCGAG
CAAGATGTAC GTCATCAAAA GGCGCAGGGC AGTGCTTTTA GCCTGGAACC CAACCTAAAA
AATAGCCCCG GTGGCATGCG CGATATCCAA ACCTTGATCT GGGTAACCCG TAAGTATTTT
GCTGCAGAGG ATATGGCGGC CTTAAGGCGG TTCGGCTTCT TTACCGCCGA CGAATATGCA
GAACTGTTAG AGTCACAGCA TTTTATCTGG CGTACGCGTT GGGCACTGCA CGCAGCGGCG
CAGCGTTCTG AGAACCGACT ACTTATAGGT TTGCAAAGTG ATGTCGCCAG GCTGATGGGC
TTTGGAGACA ACAGTCACCT CGCTATCGAA AAAATGATGC GTCAGTTATA CCGTGCAATG
AGGCGGATTA GCGAACTCAA TCAAATGTTA TTGCAGTATT TTAAAGATGA AATCCTGGTA
CAAACAGACA AGAAATCTAT CCCGTTAAAT CAACACTTCG AAATAAATGG TCGACAGATA
AATGCTCGCC ATGATGATGT ATTTGTTGAT CGCAAACAGC TTATCGCTCT GTTTATCCAT
ATTGCAGAAA ACGCGAATGA TATTGATGGT ATTTCGCCGC AGACGATTCG GTTAATACGT
CAGGTCAGAC GACGACTATT AGGTGATCTG CAAGATTTTC ATAGCTGCCG TAAAGAGTTT
ATTTCGCTGT TTCGTCATCC TCAAGGCATG GGGCTGGCGC TATCATTAAT GCACAAACAT
GGGATCTTAG CGTCATATCT TCCCCAGTGG CGTGAAATTG TGGGTCAGAT GCAGTTCGAC
CTCTACCATG TTTATCCCGT TGATGAGCAT ACTCATAAGT TACTCAAAAA CTTATATTCA
CTGAACGGCA AATCTGAAAA CCCGTCTCTT GTACAGCCTA GCGCTGTTTA CAAAGCGATA
GAGAATAAAG AGGTATTGTT GTTAGCGGCC TTGTTCCATG ATTTAGGCAA GGGACGCGGT
GGCGACCACA GTGAATTGGG GGCGGTCGAT GCGCTGCAAT TTGCTAAATT TCATGAGCTA
AAACCTTCGC AAGCTAAGGT GATAGCCTGG TTAGTTAAAA ACCATCTATT GTTATCGTTA
TCCTGCCAAC GATTAGATAT ATATGACCCT TCGGAAGTTA AAAACCTTGC TAAAGCGATA
GGGACTAAAG CCAGACTCGA TGCGCTGTAT TGTTTAACGG TTGCCGACAT TAAGGCGACA
AATGATGATC TGTGGACTAA CTGGAAGGCA ACCTTGCTCC GGGATCTCTA TTTGTCGATA
AGTTTCGCGC TGCGTAATGG CTTAGAAAAT GTTTTAGAGC AGCGAACTGT CGTCCGTGAA
CACAAAAATG AAGCACTAGA ACTGATGGGG GCGAGTGAAA CGCCTGATGT GATCAAACAG
CTTTGGAAGC GCTTACCGCT CTCATTTTTC AGTAATGCTC AACCCAGTGA AATAGCCCGT
TACTCTCATG CCATGACGCA ACATCCCGCC GATCATGCAC TTATTCTGCT GGATGAAAGC
AGTACTAAAG GTAGCAGTGA TCTATTCGTC TACATGAAGG ATAAGCCCGG CCTGTTTGTG
ACACTATTTA ATACCTTAGC TTCACTACAG ATCTCAGTTC AGCAAGCGAA TATATCTAAG
ACTAAAGATG GTTATGTGGT GGAGTCTTTA AAAATACTGG ATTATGATCA TCACCCAATA
AGAACCGCTG GGCGACGTGA CCGTATCAAG CAAAGGCTGA AACAAGTATT GTTTGAAAAT
AGAAAGGTGC CTAAACAACG CCGTAATAGC AACATTGGCT CATTCGTCAG TGAGCCTAAA
GTCGAGTTCT TGCACTCTCG TAAAAAGGAT AGAACGCTTA TCAGCGTTAC CGCACTCGAT
AATCCACAAT TTATGAGTCA CTTCTGTAAC GGCTTCAGGC AGTTTGAACT CAATATTCAC
TCGGCAAAAA TAACCACAGT TGGTGAACAG GTTGATAATG TATTTCTTGT CTCTGACAAA
GAGGGCCAAT CACTGGATGA TGAGAGCAAA CAAGCGCTAA AATCCTTCTT TGTCGATATC
ATTAAAGAAG AGGCGCCTGT TTAA
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| Protein sequence | MSDPDISPQF NAEMGITDYK KVIQDADNYF NENFTHIAID EIVKLRADFF DTLLLHLWKC
ADLADEDISL NAVGGYGRQT LHLHSDIDMC VLSSQELSPH QATQIGQFFT QLWDIGLELG
HSVLALNEID NACEDITIAT SLFEIRHLSG PESHANQVLD RLYGDDLWSS EAFYKAKFSE
QDVRHQKAQG SAFSLEPNLK NSPGGMRDIQ TLIWVTRKYF AAEDMAALRR FGFFTADEYA
ELLESQHFIW RTRWALHAAA QRSENRLLIG LQSDVARLMG FGDNSHLAIE KMMRQLYRAM
RRISELNQML LQYFKDEILV QTDKKSIPLN QHFEINGRQI NARHDDVFVD RKQLIALFIH
IAENANDIDG ISPQTIRLIR QVRRRLLGDL QDFHSCRKEF ISLFRHPQGM GLALSLMHKH
GILASYLPQW REIVGQMQFD LYHVYPVDEH THKLLKNLYS LNGKSENPSL VQPSAVYKAI
ENKEVLLLAA LFHDLGKGRG GDHSELGAVD ALQFAKFHEL KPSQAKVIAW LVKNHLLLSL
SCQRLDIYDP SEVKNLAKAI GTKARLDALY CLTVADIKAT NDDLWTNWKA TLLRDLYLSI
SFALRNGLEN VLEQRTVVRE HKNEALELMG ASETPDVIKQ LWKRLPLSFF SNAQPSEIAR
YSHAMTQHPA DHALILLDES STKGSSDLFV YMKDKPGLFV TLFNTLASLQ ISVQQANISK
TKDGYVVESL KILDYDHHPI RTAGRRDRIK QRLKQVLFEN RKVPKQRRNS NIGSFVSEPK
VEFLHSRKKD RTLISVTALD NPQFMSHFCN GFRQFELNIH SAKITTVGEQ VDNVFLVSDK
EGQSLDDESK QALKSFFVDI IKEEAPV
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