| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_3743 |
|---|
| Symbol | |
|---|
| ID | 5609740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 4557512 |
|---|
| End bp | 4557964 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640934697 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001475475 |
|---|
| Protein GI | 157376875 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4125] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTGA GCATGAACAC GAAAGAACGA ATTTTTCACA GCGTATTATT TGAAGCGATT
GCCTTAGTAT TTGTTATCAC TGCCGCCACT GTCTTTACCG ATGCCGGAGC AAAGTCAGCG
ACAGGCTTAG CTGTCGGACT GTCATTAATT GCGATGTGTT GGAATTATAT TTACAACCTG
GGTTTTGACC GTATATTTGG ATATAACCGC ATTGAGCGTA CATTTAAAAT GCGCATAGGC
CATGGACTCG GTTTTGAATT GGGTATGATT TTTGCCACAC TCCCCTTGAT GATGTGGGTA
CTGCAGCTAG ATTTCTGGAC CGTATTTGTG ATGGATATTG GCGTTGTCAT TTTCTTCCTG
GTATACGCGA TTGTCTACAA CTGGTGTTAT GACCTGCTCC GTGAGCGTAT TATCTGCAGC
AGAGCAGAAA TTAGCACTGC CGTCCCTAGA TAA
|
|---|
| Protein sequence | MRLSMNTKER IFHSVLFEAI ALVFVITAAT VFTDAGAKSA TGLAVGLSLI AMCWNYIYNL
GFDRIFGYNR IERTFKMRIG HGLGFELGMI FATLPLMMWV LQLDFWTVFV MDIGVVIFFL
VYAIVYNWCY DLLRERIICS RAEISTAVPR
|
|---|
| |